DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CngA and CNGC10

DIOPT Version :9

Sequence 1:NP_001188960.1 Gene:CngA / 36806 FlyBaseID:FBgn0261612 Length:840 Species:Drosophila melanogaster
Sequence 2:NP_001184885.1 Gene:CNGC10 / 838832 AraportID:AT1G01340 Length:711 Species:Arabidopsis thaliana


Alignment Length:774 Identity:152/774 - (19%)
Similarity:269/774 - (34%) Gaps:260/774 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   173 DHDTQQKQHYQPNASDSSYVENGRKLIQEPSKRSKPSALRRTLQALR------------------ 219
            |:..:.|...:|.:|:..|   |||        ::|| |.|..:.::                  
plant     6 DNRVRFKDEGKPLSSEYGY---GRK--------ARPS-LDRVFKNVKWGFKKPLSFPSHKDPDHK 58

  Fly   220 --QRLTKRNRPKPPDWFLEKFSNTTNTDKIGKGCPAMEDAALSSEIRGSSVLCNRLSVDPTLQSH 282
              ..:|::|...|.|.||:      |.:||                                   
plant    59 ETSSVTRKNIINPQDSFLQ------NWNKI----------------------------------- 82

  Fly   283 YRWLAIVSLAVLYNIIFVVGRAVFWEINKSAPAFWY-----------TLD-----------YLCD 325
            :.:..:|:||:                   .|.|:|           |||           .|.|
plant    83 FLFACVVALAI-------------------DPLFFYIPIVDSARHCLTLDSKLEIAASLLRTLID 128

  Fly   326 FIYLLDTLVHMHEGFL-------DQGLLVRDAFRLRRHYFHTKGWYLDVLSMLPTD----LAYIW 379
            ..|::..:......::       .:|.||.||..:...|. :..:.:|:||:||..    ||.|.
plant   129 AFYIIHIVFQFRTAYIAPSSRVFGRGELVDDAKAIALKYL-SSYFIIDLLSILPLPQIVVLAVIP 192

  Fly   380 WPPETCSSL---YLPCPVIVR-LNRLLRINRLWEWFDRTE---TATGYPNAFRICKVVLAILVLI 437
            ...:..|.|   ||...:|.: :.|:||:..|:....||.   |.|.:..|              
plant   193 SVNQPVSLLTKDYLKFSIIAQYVPRILRMYPLYTEVTRTSGIVTETAWAGA-------------- 243

  Fly   438 HWNACMYFAISY----------------------------------------------------- 449
            .||..:|...|:                                                     
plant   244 AWNLSLYMLASHVFGALWYLISVEREDRCWQEACEKTKGCNMKFLYCENDRNVSNNFLTTSCPFL 308

  Fly   450 EIGFSSDSWVYNLNGTRNNTLQ----------RQYIYSFYWSTLTLTTIGETPTPENDV-EYLFV 503
            :.|..::|.::|. |...:.|:          :::.|.|:|....|:.:|:.......| |.:|.
plant   309 DPGDITNSTIFNF-GIFTDALKSGVVESHDFWKKFFYCFWWGLRNLSALGQNLQTSKFVGEIIFA 372

  Fly   504 VADFLAGVLIFATIVGNIGSMISNMNVARVEFQNRMDGVKQYMAFRRVGHELEARVIRWFAYTWS 568
            ::..::|:::||.::||:...:.:..|...|.:.|....:|:|:.|.:..:|..|:.|:..|.|.
plant   373 ISICISGLVLFALLIGNMQKYLESTTVREEEMRVRKRDAEQWMSHRMLPEDLRKRIRRYEQYRWQ 437

  Fly   569 QSGALDEERVLAALPDKLKAEIAIQVHMDTLKQVRIFHDTEPGLLEALVLKLKLQVFSPGDYICR 633
            ::..::||.:|..||..|:.:|...:.:|.||:|.:|...:..||:|:..:|:..:::...|:.|
plant   438 ETRGVEEETLLRNLPKDLRRDIKRHLCLDLLKKVPLFEIMDEQLLDAVCDRLRPVLYTENSYVIR 502

  Fly   634 KGDVGKEMYIVKRGKLSVV----GDDGITVLATLGAGSVFGEVSVLEIAGNRTGNRR----TANV 690
            :||...||..|.||:|...    |..|......|.|....|| .:|..|.:...:..    |..|
plant   503 EGDPVGEMLFVMRGRLVSATTNGGRSGFFNAVNLKASDFCGE-DLLPWALDPQSSSHFPISTRTV 566

  Fly   691 RSLGYSDLFCLAKRDLWETLSDYPEARSTLTQ-----------------------RGCQLLRKDG 732
            ::|...:.|.|...||....|.:....|...|                       |.|:......
plant   567 QALTEVEAFALTAEDLKSVASQFRRLHSKQLQHTFRFYSVQWRTWSVSFIQAAWRRYCRRKLAKS 631

  Fly   733 LLDE-----QIFADSQRVHD--------SIEGGIEKLEL---SVENLNMRLARLLAEYT 775
            |.||     :..|...:.|:        |:.|.:.....   ::.||...::.|...||
plant   632 LRDEEDRLREALASQDKEHNAATVSSSLSLGGALYASRFASNALHNLRHNISNLPPRYT 690

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CngANP_001188960.1 Ion_trans 309..529 CDD:278921 59/323 (18%)
Ion_trans_2 <477..527 CDD:285168 12/50 (24%)
Crp 598..>722 CDD:223736 35/131 (27%)
CAP_ED 604..717 CDD:237999 31/120 (26%)
CLZ 720..791 CDD:293134 15/95 (16%)
CNGC10NP_001184885.1 PLN03192 46..>491 CDD:215625 98/520 (19%)
CAP_ED 473..604 CDD:237999 33/131 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 53 1.000 Domainoid score I4197
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

Return to query results.
Submit another query.