DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CngA and CNGC10

DIOPT Version :10

Sequence 1:NP_001188960.1 Gene:CngA / 36806 FlyBaseID:FBgn0261612 Length:840 Species:Drosophila melanogaster
Sequence 2:NP_001184885.1 Gene:CNGC10 / 838832 AraportID:AT1G01340 Length:711 Species:Arabidopsis thaliana


Alignment Length:774 Identity:152/774 - (19%)
Similarity:269/774 - (34%) Gaps:260/774 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   173 DHDTQQKQHYQPNASDSSYVENGRKLIQEPSKRSKPSALRRTLQALR------------------ 219
            |:..:.|...:|.:|:..|   |||        ::|| |.|..:.::                  
plant     6 DNRVRFKDEGKPLSSEYGY---GRK--------ARPS-LDRVFKNVKWGFKKPLSFPSHKDPDHK 58

  Fly   220 --QRLTKRNRPKPPDWFLEKFSNTTNTDKIGKGCPAMEDAALSSEIRGSSVLCNRLSVDPTLQSH 282
              ..:|::|...|.|.||:      |.:||                                   
plant    59 ETSSVTRKNIINPQDSFLQ------NWNKI----------------------------------- 82

  Fly   283 YRWLAIVSLAVLYNIIFVVGRAVFWEINKSAPAFWY-----------TLD-----------YLCD 325
            :.:..:|:||:                   .|.|:|           |||           .|.|
plant    83 FLFACVVALAI-------------------DPLFFYIPIVDSARHCLTLDSKLEIAASLLRTLID 128

  Fly   326 FIYLLDTLVHMHEGFL-------DQGLLVRDAFRLRRHYFHTKGWYLDVLSMLPTD----LAYIW 379
            ..|::..:......::       .:|.||.||..:...|. :..:.:|:||:||..    ||.|.
plant   129 AFYIIHIVFQFRTAYIAPSSRVFGRGELVDDAKAIALKYL-SSYFIIDLLSILPLPQIVVLAVIP 192

  Fly   380 WPPETCSSL---YLPCPVIVR-LNRLLRINRLWEWFDRTE---TATGYPNAFRICKVVLAILVLI 437
            ...:..|.|   ||...:|.: :.|:||:..|:....||.   |.|.:..|              
plant   193 SVNQPVSLLTKDYLKFSIIAQYVPRILRMYPLYTEVTRTSGIVTETAWAGA-------------- 243

  Fly   438 HWNACMYFAISY----------------------------------------------------- 449
            .||..:|...|:                                                     
plant   244 AWNLSLYMLASHVFGALWYLISVEREDRCWQEACEKTKGCNMKFLYCENDRNVSNNFLTTSCPFL 308

  Fly   450 EIGFSSDSWVYNLNGTRNNTLQ----------RQYIYSFYWSTLTLTTIGETPTPENDV-EYLFV 503
            :.|..::|.::|. |...:.|:          :::.|.|:|....|:.:|:.......| |.:|.
plant   309 DPGDITNSTIFNF-GIFTDALKSGVVESHDFWKKFFYCFWWGLRNLSALGQNLQTSKFVGEIIFA 372

  Fly   504 VADFLAGVLIFATIVGNIGSMISNMNVARVEFQNRMDGVKQYMAFRRVGHELEARVIRWFAYTWS 568
            ::..::|:::||.::||:...:.:..|...|.:.|....:|:|:.|.:..:|..|:.|:..|.|.
plant   373 ISICISGLVLFALLIGNMQKYLESTTVREEEMRVRKRDAEQWMSHRMLPEDLRKRIRRYEQYRWQ 437

  Fly   569 QSGALDEERVLAALPDKLKAEIAIQVHMDTLKQVRIFHDTEPGLLEALVLKLKLQVFSPGDYICR 633
            ::..::||.:|..||..|:.:|...:.:|.||:|.:|...:..||:|:..:|:..:::...|:.|
plant   438 ETRGVEEETLLRNLPKDLRRDIKRHLCLDLLKKVPLFEIMDEQLLDAVCDRLRPVLYTENSYVIR 502

  Fly   634 KGDVGKEMYIVKRGKLSVV----GDDGITVLATLGAGSVFGEVSVLEIAGNRTGNRR----TANV 690
            :||...||..|.||:|...    |..|......|.|....|| .:|..|.:...:..    |..|
plant   503 EGDPVGEMLFVMRGRLVSATTNGGRSGFFNAVNLKASDFCGE-DLLPWALDPQSSSHFPISTRTV 566

  Fly   691 RSLGYSDLFCLAKRDLWETLSDYPEARSTLTQ-----------------------RGCQLLRKDG 732
            ::|...:.|.|...||....|.:....|...|                       |.|:......
plant   567 QALTEVEAFALTAEDLKSVASQFRRLHSKQLQHTFRFYSVQWRTWSVSFIQAAWRRYCRRKLAKS 631

  Fly   733 LLDE-----QIFADSQRVHD--------SIEGGIEKLEL---SVENLNMRLARLLAEYT 775
            |.||     :..|...:.|:        |:.|.:.....   ::.||...::.|...||
plant   632 LRDEEDRLREALASQDKEHNAATVSSSLSLGGALYASRFASNALHNLRHNISNLPPRYT 690

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CngANP_001188960.1 Ion_trans 282..529 CDD:459842 62/350 (18%)
CAP_ED 604..717 CDD:237999 31/120 (26%)
CLZ 720..790 CDD:465160 15/95 (16%)
CNGC10NP_001184885.1 PLN03192 46..>491 CDD:215625 98/520 (19%)
CAP_ED 473..604 CDD:237999 33/131 (25%)

Return to query results.
Submit another query.