DRSC/TRiP Functional Genomics Resources

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Protein Alignment CngA and CNGC4

DIOPT Version :10

Sequence 1:NP_001188960.1 Gene:CngA / 36806 FlyBaseID:FBgn0261612 Length:840 Species:Drosophila melanogaster
Sequence 2:NP_200236.1 Gene:CNGC4 / 835513 AraportID:AT5G54250 Length:694 Species:Arabidopsis thaliana


Alignment Length:630 Identity:113/630 - (17%)
Similarity:219/630 - (34%) Gaps:169/630 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   126 GIHRQPGGGAEQDEDEEEDDDDVDEDDDDEFGASVCEDNPEEAIARADHDTQQKQHYQPNASDSS 190
            |.:.:.....|:||:|||.::..:|::::|      |::|...:..                   
plant    21 GYYSEEDNTEEEDEEEEEMEEIEEEEEEEE------EEDPRIGLTC------------------- 60

  Fly   191 YVENGRKLIQEPSKRSKPSALRRTLQALRQRLTKRNRPKPPDWFLEKFSNTTNTDKIGKGCPAME 255
               .||:  ...|..:|...|.|.|....:.:.:.|:.     ||...:.....|.:.....::.
plant    61 ---GGRR--NGSSNNNKWMMLGRILDPRSKWVREWNKV-----FLLVCATGLFVDPLFLYTLSVS 115

  Fly   256 DAALSSEIRGSSVLCNRLSVDPTLQSHYRWLAIVSLAVLYNIIFVVGRAVFWEINKSAPAFWYTL 320
            |.            |..|.||       .|||:...|                           |
plant   116 DT------------CMCLLVD-------GWLALTVTA---------------------------L 134

  Fly   321 DYLCDFIYLLDTLVHM------------HEGFLDQGLLVRDAFRLRRHYFHTKGWYLDVLSMLPT 373
            ..:.|.::|.:..:..            .:|..::|...|.:.|:...|....|::.|:..:||.
plant   135 RSMTDLLHLWNIWIQFKIARRWPYPGGDSDGDTNKGGGTRGSTRVAPPYVKKNGFFFDLFVILPL 199

  Fly   374 DLAYIWWPPET---------------CSSLYLPCPVIVRLNRLLRIN---------RLWE----- 409
            ....:|....:               .:.|:...|.|....|.||.|         .:|.     
plant   200 PQVVLWVVIPSLLKRGSVTLVVSVLLVTFLFQYLPKIYHSIRHLRRNATLSGYIFGTVWWGIALN 264

  Fly   410 --------------WF------------DRTETATGYPNAFRICKVVL----AILVL----IHW- 439
                          |:            ::.|...|.......||..:    .::||    :.| 
plant   265 MIAYFVAAHAAGACWYLLGVQRSAKCLKEQCENTIGCDLRMLSCKEPVYYGTTVMVLDRARLAWA 329

  Fly   440 ------NACMYFAISYEIGFSSDSWVYNLNGTRNNTLQRQYIYSFYWSTLTLTTIGETPTPENDV 498
                  :.|:....:|..|  :..|...|..:.:..  .:.::..:|..:||:|.|...:.....
plant   330 QNHQARSVCLDINTNYTYG--AYQWTIQLVSSESRL--EKILFPIFWGLMTLSTFGNLESTTEWS 390

  Fly   499 EYLFVVADFLAGVLIFATIVGNIGSMISNMNVARVEFQNRMDGVKQYMAFRRVGHELEARVIRWF 563
            |.:|.:....:|:|:...::|||...:......:.....:|..::.:|..|.:......||..:.
plant   391 EVVFNIIVLTSGLLLVTMLIGNIKVFLHATTSKKQAMHLKMRNIEWWMKKRHLPIGFRQRVRNYE 455

  Fly   564 AYTWSQSGALDEERVLAALPDKLKAEIAIQVHMDTLKQVRIFHDTEPGLLEALVLKLKLQVFSPG 628
            ...|:....:||..::..||:.|:.:|...:.:|.::||.:|...:..:||.:..::|..:|:.|
plant   456 RQRWAAMRGVDECEMVQNLPEGLRRDIKYHLCLDLVRQVPLFQHMDDLVLENICDRVKSLIFTKG 520

  Fly   629 DYICRKGDVGKEMYIVKRGKL--SVVGDDGITVLATLGAGSVFGE 671
            :.|.::||..:.|..|.||.|  |.:..||:.....||.|:..|:
plant   521 ETIQKEGDAVQRMLFVVRGHLQSSQLLRDGVKSCCMLGPGNFSGD 565

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CngANP_001188960.1 Ion_trans 282..529 CDD:459842 50/328 (15%)
CAP_ED 604..717 CDD:237999 21/70 (30%)
CLZ 720..790 CDD:465160
CNGC4NP_200236.1 PLN03192 <370..>565 CDD:215625 47/194 (24%)
CAP_ED 496..602 CDD:237999 21/70 (30%)
Blue background indicates that the domain is not in the aligned region.

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