DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CngA and CNGC17

DIOPT Version :9

Sequence 1:NP_001188960.1 Gene:CngA / 36806 FlyBaseID:FBgn0261612 Length:840 Species:Drosophila melanogaster
Sequence 2:NP_194765.2 Gene:CNGC17 / 829159 AraportID:AT4G30360 Length:720 Species:Arabidopsis thaliana


Alignment Length:785 Identity:153/785 - (19%)
Similarity:274/785 - (34%) Gaps:215/785 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   187 SDSSYVENGRKLIQEPS----KRSKPSALRRTLQALRQRLTKRNRPKPPDWFLEKFSNTTNTDKI 247
            |:....:..:..:.:|.    |.|.|||||      ...|...||.:..|               
plant    13 SEGKESKEAKWAVNDPMSKSYKLSLPSALR------PDNLLPGNRLRYTD--------------- 56

  Fly   248 GKGCPAMEDAALSSEIRGSSVLCNRLSVDP--TLQSHYRWLAIVSLAV------LYNIIFVVGRA 304
                        :|:.:.|.|...:..:||  .:...:.|:.|||..|      ||..:..:|. 
plant    57 ------------ASKSKSSKVSWYKTILDPGSEIVLKWNWVFIVSCMVALFIDPLYFFVPAIGG- 108

  Fly   305 VFWEINKSAP------------AFWYTLDYLCDFIYLLDTLVHMHEGFL---------DQGLLVR 348
                 :|:.|            .|:.|   :.|..|||...:....||:         .:|.||.
plant   109 -----DKNYPCARTDTSLSILVTFFRT---IADLFYLLHIFIKFRTGFIAPNSSTRVFGRGELVM 165

  Fly   349 DAFRLRRHYFHTKGWYLDVLSMLPTDLAYIWWPPETCSS---------------------LYLPC 392
            |...:...|..: .:.:|:::.||.....||:...|..|                     .||..
plant   166 DPKAIAWRYIKS-DFIIDLIATLPLPQIVIWFVISTTKSYRFDHNNNAIALIVLLQYIPRFYLII 229

  Fly   393 PVIVRLNRLLRINRLWEWFDRTETATGYPNAFRICKVVLAILVLIHWNACMYFAISYEIG----- 452
            |:..::.:...:.....|.........|..|..:......||.:..:.:|.....:.|.|     
plant   230 PLSSQIVKATGVVTKTAWAGAAYNLLLYMLASHVLGAAWYILSVDRYTSCWKSRCNGEAGQVNCQ 294

  Fly   453 ---FSSDS--------W-----VYNLNGTRN--------------NTLQRQ----YIYSFYWSTL 483
               ...||        |     |:.|...||              |.:..|    |.|..:|...
plant   295 LYYLDCDSMYDNNQMTWANVTKVFKLCDARNGEFKYGIFGNAITKNVVSSQFFERYFYCLWWGLQ 359

  Fly   484 TLTTIGE---TPTPENDVEYLFVVADFLAGVLIFATIVGNIGSMISNMNVARVEFQNRMDGVKQY 545
            .|::.|:   |.....:..:..::|.|  |:::||.::||:.:.:.::.|...|::.:....:::
plant   360 QLSSYGQNLSTTMFMGETTFAVLIAIF--GLVLFAHLIGNMQTYLQSLTVRLEEWRLKKRDTEEW 422

  Fly   546 MAFRRVGHELEARVIRWFAYTWSQSGALDEERVLAALPDKLKAEIAIQVHMDTLKQVRIFHDTEP 610
            |..|::..||..||.|:..|.|..:..:|||.:|.:||..|:.:|...:.:|.:::|..|...:.
plant   423 MRHRQLPEELRNRVRRYEQYKWLATRGVDEEVLLQSLPTDLRRDIQRHLCLDLVRRVPFFSQMDD 487

  Fly   611 GLLEALVLKLKLQVFSPGDYICRKGDVGKEMYIVKRGKLSVV----GDDGITVLATLGAGSVFGE 671
            .||:|:..:|...:.:.|.|:.|:||:..||..:.||:|...    |..|......|..|...||
plant   488 QLLDAICERLVSSLCTEGTYLVREGDLISEMLFIIRGRLESSTTNGGRTGFFNSIILRPGDFCGE 552

  Fly   672 ---------VSVLEIAGNRTGNRRTANVRSLGYSDLFCLAKRDLWETLSDYPEARSTLTQR---- 723
                     .|.|.:..:      |..||:|...:.|.|...||....:.:....|...|.    
plant   553 ELLSWALLPKSTLNLPSS------TRTVRALVEVEAFALRAEDLKFVANQFRRLHSKKLQHTFRF 611

  Fly   724 ---------GCQLLR-----KDGLLDEQIFADSQRVHDSIEGGIEKLELSVE---------NLNM 765
                     .|.:..     |..:::..:.|.....::..|.|.|.:.:..|         .:|:
plant   612 YSHHWRTWAACFIQAAWRRYKRRVMENNLTAIESMENEEGEVGEELVVVEEEECVEESPRTKMNL 676

  Fly   766 RLARLLAEYTASQAK--IKQRLAKLEMNGGPGTWRLECEPQSRARSGRLYSLQPKRRPRSRPDAT 828
            .:..|.:.:.|:..:  ..||:..:|:                          |:.:....||.:
plant   677 GVMVLASRFAANTRRGVAAQRVKDVEL--------------------------PRFKKPEEPDFS 715

  Fly   829 AKSSD 833
            |:..|
plant   716 AEHDD 720

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CngANP_001188960.1 Ion_trans 309..529 CDD:278921 55/303 (18%)
Ion_trans_2 <477..527 CDD:285168 11/52 (21%)
Crp 598..>722 CDD:223736 33/136 (24%)
CAP_ED 604..717 CDD:237999 31/125 (25%)
CLZ 720..791 CDD:293134 14/99 (14%)
CNGC17NP_194765.2 PLN03192 131..>490 CDD:215625 73/361 (20%)
CAP_ED 481..612 CDD:237999 33/136 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 53 1.000 Domainoid score I4197
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1073751at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.920

Return to query results.
Submit another query.