DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CngA and CNGC13

DIOPT Version :9

Sequence 1:NP_001188960.1 Gene:CngA / 36806 FlyBaseID:FBgn0261612 Length:840 Species:Drosophila melanogaster
Sequence 2:NP_001319839.1 Gene:CNGC13 / 826427 AraportID:AT4G01010 Length:696 Species:Arabidopsis thaliana


Alignment Length:644 Identity:150/644 - (23%)
Similarity:250/644 - (38%) Gaps:160/644 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   248 GKGCPAMEDAALSSEIRGSSVLCNRLSVDPTLQSHYRWLAIVSLAVLYNIIFVVGRAVFWEINKS 312
            |:|....:..|::.:...|..:.:.||:.|..|       :|.|||:.|            :|| 
plant   152 GRGELVDDPKAIAIKYLSSYFIIDLLSILPLPQ-------LVVLAVIPN------------VNK- 196

  Fly   313 APAFWYTLDYLCDF-----------IYLLDTLVHMHEGFLDQGLLVRDAFRLRRHYF--HTKG-- 362
             |....|.|||...           ||.|.|.|....|.:.:......|:.|..:..  |..|  
plant   197 -PVSLITKDYLITVIFTQYIPRILRIYPLYTEVTRTSGIVTETAWAGAAWNLSLYMLASHVFGAL 260

  Fly   363 WYLDVLSMLPTDLAYIWWP------PETCSSLYLPCPVIVRLNRLLRINRLWEWFDRTETATGYP 421
            |||  :|:...|..   |.      ||.|:..:|.|..    |..:|       .|...|:..:.
plant   261 WYL--ISVEREDRC---WREACEKIPEVCNFRFLYCDG----NSSVR-------NDFLTTSCPFI 309

  Fly   422 NAFRICKVVLAILVLIHWNACMY----FAISYEIGF--SSDSWVYNLNGTRNNTLQRQYIYSFYW 480
            |...|.            |:.::    |..:.:.|.  |.|.|             :::.|.|:|
plant   310 NPDDIT------------NSTVFNFGIFTDALKSGIVESDDFW-------------KKFFYCFWW 349

  Fly   481 STLTLTTIGETPTPENDV-EYLFVVADFLAGVLIFATIVGNIGSMISNMNVARVEFQNRMDGVKQ 544
            ....|:.:|:.......| |.:|.|:..::|:::||.::||:...:.:..|...|.:.|....:|
plant   350 GLRNLSALGQNLNTSKFVGEIIFAVSICISGLVLFALLIGNMQKYLESTTVREEEMRVRKRDAEQ 414

  Fly   545 YMAFRRVGHELEARVIRWFAYTWSQSGALDEERVLAALPDKLKAEIAIQVHMDTLKQVRIFHDTE 609
            :|:.|.:..:|..|:.|:..|.|.::..::||.:|..||..|:.:|.....:|.||:|.:|...:
plant   415 WMSHRMLPDDLRKRIRRYEQYKWQETRGVEEENLLRNLPKDLRRDIKRHFCLDLLKKVPLFEIMD 479

  Fly   610 PGLLEALVLKLKLQVFSPGDYICRKGDVGKEMYIVKRGKLSVVGDDGITVLATLGAGSVFGEVSV 674
            ..||:|:..|||..:::...|..|:||..:||..|.||||         :.||..          
plant   480 EQLLDAVCDKLKPVLYTENSYAIREGDPVEEMLFVMRGKL---------MSATTN---------- 525

  Fly   675 LEIAGNRTGNRRTANVRSLGYSDLFCLAKRDLW----ETLSDYPEARST---LTQRGCQLLRKDG 732
                |.|||   ..|...|..|| ||......|    ::.|.:|.:..|   ||:.....|..|.
plant   526 ----GGRTG---FFNAVYLKPSD-FCGEDLLTWALDPQSSSHFPISTRTVQALTEVEAFALAADD 582

  Fly   733 LLDEQIFADSQRVHDSIEGGIEKLE-----LSVE---------------NLNMRLARLLAEYTAS 777
            |  :.:.:..:|:|.      ::|:     .||:               :...:|||.|.|   .
plant   583 L--KLVASQFRRLHS------KQLQHTFRFYSVQWRTWGASFIQAAWRRHCRRKLARSLTE---E 636

  Fly   778 QAKIKQRLAKLEMNGGPGTWRLECEPQSRARSGRLYSLQPKRRP-----RSRPDATAKS 831
            :.:.:..:.|.|.|....:..:.....||..|..|.:|:....|     .|.||.:.::
plant   637 EDRFRNAITKRERNAASSSSLVATLYASRFASNALRNLRTNNLPLLPPKPSEPDFSLRN 695

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CngANP_001188960.1 Ion_trans 309..529 CDD:278921 54/247 (22%)
Ion_trans_2 <477..527 CDD:285168 13/50 (26%)
Crp 598..>722 CDD:223736 38/130 (29%)
CAP_ED 604..717 CDD:237999 33/116 (28%)
CLZ 720..791 CDD:293134 17/90 (19%)
CNGC13NP_001319839.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 53 1.000 Domainoid score I4197
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1073751at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.920

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