DRSC/TRiP Functional Genomics Resources

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Protein Alignment CngA and CNGC16

DIOPT Version :9

Sequence 1:NP_001188960.1 Gene:CngA / 36806 FlyBaseID:FBgn0261612 Length:840 Species:Drosophila melanogaster
Sequence 2:NP_190384.1 Gene:CNGC16 / 823956 AraportID:AT3G48010 Length:705 Species:Arabidopsis thaliana


Alignment Length:609 Identity:121/609 - (19%)
Similarity:213/609 - (34%) Gaps:180/609 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   225 RNRPKPPDWFLEKFSNTTNTDKIGKGCPAMEDAALSSEIRGSSVLCNRLSVDPTLQSHYRWLAIV 289
            |.|..|..:.|....|..|..:         ..::.|::|..       ::||......||    
plant    11 RFRNFPTTFSLRHHHNDPNNQR---------RRSIFSKLRDK-------TLDPGGDLITRW---- 55

  Fly   290 SLAVLYNIIFVVG--RAVFWEINKSAPAFWY-----------TLDY-----------LCDFIYLL 330
                  |.||::.  .|:|.:     |.::|           ::|.           |.|..:|:
plant    56 ------NHIFLITCLLALFLD-----PLYFYLPIVQAGTACMSIDVRFGIFVTCFRNLADLSFLI 109

  Fly   331 DTLVHMHEGFLD-------QGLLVRDAFRLRRHYFHTKGWYLDVLSMLPTDLAYIWWPPETCS-- 386
            ..|:.....|:.       :|.||.|...:...|..:: :.:|:.:.||.....||:......  
plant   110 HILLKFKTAFVSKSSRVFGRGELVMDRREIAIRYLKSE-FVIDLAATLPLPQIMIWFVIPNAGEF 173

  Fly   387 ----------SLYLPCPVIVRLNRLLRINRLWEWFDRTETATGYPNAFRICKVVLAILVLIHW-- 439
                      ||.:....:.|...:|.:||      |...|||             :.....|  
plant   174 RYAAHQNHTLSLIVLIQYVPRFLVMLPLNR------RIIKATG-------------VAAKTAWSG 219

  Fly   440 ---NACMYFAISYEIGF---------SSDSW----VYNLNGT----------------------- 465
               |..:|..:|:.:|.         ..:.|    :..:|.|                       
plant   220 AAYNLILYLLVSHVLGSVWYVLSIQRQHECWRRECIKEMNATHSPSCSLLFLDCGSLHDPGRQAW 284

  Fly   466 ------------RNNTLQR---------------------QYIYSFYWSTLTLTTIGETPTPEN- 496
                        ||:..|.                     :|.|..:|....|::.|::..... 
plant   285 MRITRVLSNCDARNDDDQHFQFGMFGDAFTNDVTSSPFFDKYFYCLWWGLRNLSSYGQSLAASTL 349

  Fly   497 DVEYLFVVADFLAGVLIFATIVGNIGSMISNMNVARVEFQNRMDGVKQYMAFRRVGHELEARVIR 561
            ..|.:|.....:||::.|:.::||:.:.:.:......|::.|....:::|..|::..||:.||.|
plant   350 SSETIFSCFICVAGLVFFSHLIGNVQNYLQSTTARLDEWRVRRRDTEEWMRHRQLPDELQERVRR 414

  Fly   562 WFAYTWSQSGALDEERVLAALPDKLKAEIAIQVHMDTLKQVRIFHDTEPGLLEALVLKLKLQVFS 626
            :..|.|..:..:|||.:|.|||..|:.:|...:.:..:::|..|...:..||:|:..:|...:.:
plant   415 FVQYKWLTTRGVDEEAILRALPLDLRRQIQRHLCLALVRRVPFFAQMDDQLLDAICERLVPSLNT 479

  Fly   627 PGDYICRKGDVGKEMYIVKRGKLSVV----GDDGITVLATLGAGSVFGE-----VSVLEIAGNRT 682
            ...|:.|:||...||..:.||::...    |..|.....||..|...||     ..|..|..|..
plant   480 KDTYVIREGDPVNEMLFIIRGQMESSTTDGGRSGFFNSITLRPGDFCGEELLTWALVPNINHNLP 544

  Fly   683 GNRRTANVRSLGYSDLFCLAKRDL 706
            .:.||  ||:|...:.|.|...||
plant   545 LSTRT--VRTLSEVEAFALRAEDL 566

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CngANP_001188960.1 Ion_trans 309..529 CDD:278921 51/335 (15%)
Ion_trans_2 <477..527 CDD:285168 10/50 (20%)
Crp 598..>722 CDD:223736 33/118 (28%)
CAP_ED 604..717 CDD:237999 32/112 (29%)
CLZ 720..791 CDD:293134
CNGC16NP_190384.1 Ion_trans 94..386 CDD:278921 48/311 (15%)
Crp 451..>586 CDD:223736 33/118 (28%)
CAP_ED 457..588 CDD:237999 32/112 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 53 1.000 Domainoid score I4197
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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