DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CngA and CNGC12

DIOPT Version :9

Sequence 1:NP_001188960.1 Gene:CngA / 36806 FlyBaseID:FBgn0261612 Length:840 Species:Drosophila melanogaster
Sequence 2:NP_001324486.1 Gene:CNGC12 / 819253 AraportID:AT2G46450 Length:649 Species:Arabidopsis thaliana


Alignment Length:515 Identity:106/515 - (20%)
Similarity:197/515 - (38%) Gaps:121/515 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   288 IVSLAV--LYNIIFVVGRAVFWEINKSAPAFWYTLD-----------------YLCDFIYLL--D 331
            :|:||:  |:..|.::          .:..|.:|.|                 |:...||.|  :
plant    49 VVALAIDPLFLFIPLI----------DSQRFCFTFDKTLVAVVCVIRTFIDTFYVIHIIYYLITE 103

  Fly   332 TLVHMHEGFLDQGLLVRDAFRLR-RHYFHTKGWYLDVLSMLPTDLAYIWWPPETCSSLYLPCPVI 395
            |:....:..|...::|.....|: |..||   :.:|::|:||.        |:......:|....
plant   104 TIAPRSQASLRGEIVVHSKATLKTRLLFH---FIVDIISVLPI--------PQVVVLTLIPLSAS 157

  Fly   396 VRLNRLL----------RINRLWEWFDRTETATGYPNAFRICKVVLAI-LVLIH----------- 438
            :...|:|          ||.|::..:.....|.|.....:.....|.: |.::|           
plant   158 LVSERILKWIILSQYVPRIIRMYPLYKEVTRAFGTVAESKWAGAALNLFLYMLHSYVFGAFWYLS 222

  Fly   439 --------WNA-------------------------------CMYF-------AISYEIGFSSDS 457
                    |.|                               |...       :..::.|...|:
plant   223 SIERKSKCWRAACARTSDCNLTVTDLLCKRAGSDNIRFLNTSCPLIDPAQITNSTDFDFGMYIDA 287

  Fly   458 WVYNLNGTRNNTLQRQYIYSFYWSTLTLTTIGETPTPENDV-EYLFVVADFLAGVLIFATIVGNI 521
            ....:...:.....|:::|.|:|....::.:|:.....|.. |..|.:...::|:|:||.::||:
plant   288 LKSGVLEVKPKDFPRKFVYCFWWGLRNISALGQNLETSNSAGEIFFAIIICVSGLLLFAVLIGNV 352

  Fly   522 GSMISNMNVARVEFQNRMDGVKQYMAFRRVGHELEARVIRWFAYTWSQSGALDEERVLAALPDKL 586
            ...:.:......|.:.:....:::|::|.:...|:.|:.|:..|.|.::...:||.:|.:||..|
plant   353 QKYLQSSTTRVDEMEEKRRDTEKWMSYRVIPEYLKERIRRFEDYKWRETKGTEEEALLRSLPKDL 417

  Fly   587 KAEIAIQVHMDTLKQVRIFHDTEPG-LLEALVLKLKLQVFSPGDYICRKGDVGKEMYIVKRGKL- 649
            :.|....:::|.||:|...:..:.| ||||:..::|...:....:|.|:|...:||.||.|||| 
plant   418 RLETKRYLYLDMLKRVPWLNIMDDGWLLEAVCDRVKSVFYLANSFIVREGHPVEEMLIVTRGKLK 482

  Fly   650 SVVGDDGITV---LATLGAGSVFGEVSVLEIAGNRTGNRRTANVRSLGYSDLFCLAKRDL 706
            |..|...:.|   ...|..|.:.||   |...|:|... .|..|.:|...:.|.|...|:
plant   483 STTGSHEMGVRNNCCDLQDGDICGE---LLFNGSRLPT-STRTVMTLTEVEGFILLPDDI 538

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CngANP_001188960.1 Ion_trans 309..529 CDD:278921 49/308 (16%)
Ion_trans_2 <477..527 CDD:285168 12/50 (24%)
Crp 598..>722 CDD:223736 36/114 (32%)
CAP_ED 604..717 CDD:237999 33/108 (31%)
CLZ 720..791 CDD:293134
CNGC12NP_001324486.1 Ion_trans <302..362 CDD:395416 14/59 (24%)
CAP_ED 435..560 CDD:237999 33/108 (31%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1073751at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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