DRSC/TRiP Functional Genomics Resources

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Protein Alignment CngA and cngb3.1

DIOPT Version :10

Sequence 1:NP_001188960.1 Gene:CngA / 36806 FlyBaseID:FBgn0261612 Length:840 Species:Drosophila melanogaster
Sequence 2:XP_068075500.2 Gene:cngb3.1 / 562675 ZFINID:ZDB-GENE-090611-1 Length:987 Species:Danio rerio


Alignment Length:579 Identity:167/579 - (28%)
Similarity:292/579 - (50%) Gaps:67/579 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   166 EEAIARADHDTQQKQHYQPNASDSSYVENGRKLIQEPSKRSKPSALRRTLQALRQRLTKRNRPKP 230
            ||.|.|.:.:.::|:       |.:.....:|..:|..|:.|...|:...:|..:...:...||.
Zfish   212 EERIKREEAEQKKKE-------DDAKRAAAKKEKEEKEKKEKEEKLKAEKEAADKEAAEAMFPKI 269

  Fly   231 P----DWFLEKFSNTTNTDKIGKGCPAMEDAALSSEIRGSSVLCNRLSVDPTLQSHY-RWLAIVS 290
            .    |..|:.|.     ||:        |:.|.:            ::||.....| :||::|:
Zfish   270 KCTCIDTLLKPFE-----DKM--------DSYLGA------------TIDPFTDRRYIKWLSVVT 309

  Fly   291 LAVLYNIIFVVGRAVFWEINKSAPAFWYTLDYLCDFIYLLD-TLVHMHEGFLDQGLLVRDAFRLR 354
            :|..||:.....|..|.....:...||...|:|.|.:.::| |:......|:..|.:::|..:.:
Zfish   310 VAFNYNVWLATARLCFPYHTPATIPFWILFDFLADLVNVIDITMFQPRLQFVKAGDIIKDRVQTK 374

  Fly   355 RHYFHTKGWYLDVLSMLPTDLAYIWWPPETC-----SSLYLPCPVIVRLNRLLRINRLWEWFDRT 414
            ::|..:..:..|::|::|.||        .|     :|.:       ||||.:|....:|:.||.
Zfish   375 QNYRESARFQTDLISIIPFDL--------LCFQFGFTSFF-------RLNRFMRYQSFFEFSDRL 424

  Fly   415 ETATGYPNAFRICKVVLAILVLIHWNACMYFAISYEIGFSSDSWVYNLNGTRNNTLQRQYIYSFY 479
            |:.......:|:.:....:|..:|.|:|:|:..|...|..|..|.|       :.|...|:..:|
Zfish   425 ESIMAKAYIWRVGRTTGYLLYCLHINSCLYYVASEYEGLGSSRWTY-------DGLGNAYLRCYY 482

  Fly   480 WSTLTLTTIGETPTPENDVEYLFVVADFLAGVLIFATIVGNIGSMISNMNVARVEFQNRMDGVKQ 544
            ::|.||.|||..|.|....|.:|.:.:|..||.:|::::|.:..:|......:..|:..||....
Zfish   483 FATRTLITIGGLPEPHTLFEIVFQLVNFFTGVFVFSSLIGQMRDVIGAATAGQTYFRASMDSCVA 547

  Fly   545 YMAFRRVGHELEARVIRWFAYTWSQSGALDEERVLAALPDKLKAEIAIQVHMDTLKQVRIFHDTE 609
            ||....:...:::||..|:.|||...|.|||..:|..:|..::..||:.:::.|.:::.:|...:
Zfish   548 YMNTYTIPKLVQSRVRTWYNYTWDSQGMLDESELLDKMPLVMRTAIAVDINLATFQKIDLFKGCD 612

  Fly   610 PGLLEALVLKLKLQVFSPGDYICRKGDVGKEMYIVKRGKLSVV-GDDGITVLATLGAGSVFGEVS 673
            ..:|..::|:||..|:.|||::|:|||:|:||||:|.|::.|: |.|...|..||.||.||||:|
Zfish   613 NQMLVDMLLRLKSIVYLPGDFVCKKGDIGREMYIIKAGEVQVIGGPDNKIVFVTLKAGCVFGEIS 677

  Fly   674 VLEIAGNRTGNRRTANVRSLGYSDLFCLAKRDLWETLSDYPEARSTLTQRGCQLLRKDG 732
            :|:.|.: .||||||||.:.|:::||.|.|:||.:.|..|||::..|.::|.:|::..|
Zfish   678 LLQSAKD-GGNRRTANVAAHGFANLFVLDKKDLNDILIHYPESQKVLAKKGRKLMKAKG 735

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CngANP_001188960.1 Ion_trans 282..529 CDD:459842 66/253 (26%)
CAP_ED 604..717 CDD:237999 54/113 (48%)
CLZ 720..790 CDD:465160 4/13 (31%)
cngb3.1XP_068075500.2 None

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