DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CngA and hcn3

DIOPT Version :9

Sequence 1:NP_001188960.1 Gene:CngA / 36806 FlyBaseID:FBgn0261612 Length:840 Species:Drosophila melanogaster
Sequence 2:XP_689197.1 Gene:hcn3 / 560709 ZFINID:ZDB-GENE-060503-193 Length:639 Species:Danio rerio


Alignment Length:716 Identity:161/716 - (22%)
Similarity:281/716 - (39%) Gaps:157/716 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 GYNLSNRPMYRTTRLVGPASSAPAQLQLPCGSH---QATLGVAPPPLE-EISGGLFAPFAPTATI 92
            |::|:.......|.|.|.|.....:| |...:|   ::..|.:|.... |::.||....|.|.|:
Zfish    21 GFSLTGWRSSSKTLLRGEAEDVSRRL-LSIVNHNQERSDSGASPTSKSLEVTAGLDGTTATTTTV 84

  Fly    93 TVEQAATSIPMAVDGEVHHLHYPRRSWQRKYRQGIHRQPGGGAEQDEDEEEDDDDVDEDDDDEFG 157
            |.  |...:|        |...|..|                                      |
Zfish    85 TA--ATPPLP--------HKAMPESS--------------------------------------G 101

  Fly   158 ASVCEDNPEEAIARADHDTQQKQHYQPNASDSSYVENGRKLIQEPSKRSKPSALRRTLQALRQRL 222
            |.|..:                      |.|..:|:             :.:.|:|...::.|  
Zfish   102 APVASE----------------------AEDGPFVD-------------QSTFLQRQFSSMLQ-- 129

  Fly   223 TKRNRPKPPDWFLEKFSNTTNTDKIGKGCPAMEDAALSSEIRGSSVLCNRLSVDPTLQSHYRWLA 287
                 |....:.|..|.:       .||..|.:|...|..:         ..:.|.....:.|..
Zfish   130 -----PGVNKFSLRMFGS-------AKGVAAEQDRVKSFGV---------WIIHPYSDFRFYWDL 173

  Fly   288 IVSLAVLYNIIFVVGRAVFWEINKSAPAFWYTLDYLCDFIYLLDTLVHMHEGFL--DQGLLVRDA 350
            ::...::.|::.:.....|:|...:.|  |.|.:...|.::|.|.:.:...|.:  |...::.|.
Zfish   174 VMLCLMMGNLVILPWGITFFEDQNTLP--WITFNVASDTLFLADLVFNFRTGIMEGDNSEIILDP 236

  Fly   351 FRLRRHYFHTKGWYL-DVLSMLPTDLAYIWWPPET---CSSLYLPCPV--------IVRLNRLLR 403
            ..:.|.|.  :||:| |.:|.:|.|..::....|:   .:.:|.....        |:.|.||||
Zfish   237 QIISRRYL--RGWFLVDFISSIPVDYIFLIVDIESRLESAEVYRTARALRIVRFTKILSLLRLLR 299

  Fly   404 INRL------WE-----WFDRTETATGYPNAFRICKVVLAILVLIHWNACMYFAISYEIGFSSDS 457
            ::||      ||     .:|......      ||..::..:|:|.||:.||.|.:.....|.|..
Zfish   300 LSRLIRYIHQWEEIFHMTYDLASAVV------RIVNLIGMMLLLCHWDGCMQFMVPMLQDFPSTC 358

  Fly   458 WVYNLNGTRNNTLQRQYIYSFYWSTLTLTTIG-ETPTPENDVEYLFVVADFLAGVLIFATIVGNI 521
            || :.|...|:|...||.|:.:.:...:..|| ....||...:....:...:.|...:|..:||.
Zfish   359 WV-SKNNMVNSTWDVQYSYALFMAMSHMLCIGYGAQAPEGPTDVWLTMISMIIGATCYAMFLGNA 422

  Fly   522 GSMISNMNVARVEFQNRMDGVKQYMAFRRVGHELEARVIRWFAYTWSQSGALDEERVLAALPDKL 586
            .:::.:::.:..::|.:...|:|||:|.::..::..|:..::.:.: |....|||.:|..|.|.|
Zfish   423 TNLVQSLDASHRQYQEKYKQVEQYMSFHKLPADMRQRIHDYYEHRF-QGKMFDEENILEELSDPL 486

  Fly   587 KAEIAIQVHMDTLKQVRIFHDTEPGLLEALVLKLKLQVFSPGDYICRKGDVGKEMYIVKRGKLSV 651
            |.||........:..:.:|.:.:|..:..|:.||:.:||.|||.|.|:|.:|::||.::.|.:||
Zfish   487 KEEIVNYNCRGLVANMPLFANADPHFVTVLLSKLRFEVFQPGDVIIREGTLGRKMYFIQHGCVSV 551

  Fly   652 VGDDGITVLATLGAGSVFGEVSVLEIAGNRTGNRRTANVRSLGYSDLFCLAKRDLWETLSDYPEA 716
            :..|...  ..|..|..|||:.:|      |..||||:||:..|..|:.|:.....|.|.:.|..
Zfish   552 ITSDNKE--KKLNDGCYFGEICLL------TRGRRTASVRADTYCRLYSLSVDSFNEVLEENPLM 608

  Fly   717 R 717
            |
Zfish   609 R 609

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CngANP_001188960.1 Ion_trans 309..529 CDD:278921 58/245 (24%)
Ion_trans_2 <477..527 CDD:285168 8/50 (16%)
Crp 598..>722 CDD:223736 40/120 (33%)
CAP_ED 604..717 CDD:237999 39/112 (35%)
CLZ 720..791 CDD:293134
hcn3XP_689197.1 Ion_trans_N 124..166 CDD:285597 10/64 (16%)
Ion_trans 186..429 CDD:278921 60/253 (24%)
Ion_trans_2 <377..427 CDD:285168 8/49 (16%)
Crp 498..>622 CDD:223736 40/120 (33%)
CAP_ED 504..612 CDD:237999 40/114 (35%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170578279
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.840

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