DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CngA and hcn4l

DIOPT Version :9

Sequence 1:NP_001188960.1 Gene:CngA / 36806 FlyBaseID:FBgn0261612 Length:840 Species:Drosophila melanogaster
Sequence 2:XP_684730.5 Gene:hcn4l / 556759 ZFINID:ZDB-GENE-110411-3 Length:1188 Species:Danio rerio


Alignment Length:716 Identity:169/716 - (23%)
Similarity:294/716 - (41%) Gaps:130/716 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   103 MAVDGEVHHLHYPRRSWQRKY---------RQGIHRQPGGGAEQD-------------------- 138
            |..|||.......|:|.:.|:         .:|:.....|.||.|                    
Zfish    25 MTRDGEDSDKDTRRKSVKMKHFPSPSSTGSSKGVCEAKSGDAETDVGRPFRTNVNGDCRRFRGSL 89

  Fly   139 ----EDEEEDDDDVDEDDDDEFGASVCEDNPEEAIARADHDTQQKQHYQPNASDSSYVENGRKLI 199
                ......|.|:.|.......||..:|.|.|               ||...:|...:.||   
Zfish    90 SSLTSRHAAPDADLAEQRRLIGDASPEDDGPSE---------------QPGPGESPGAKGGR--- 136

  Fly   200 QEPSKRSKPSALRRT---LQALRQRLTKRNRPKPPDWFLEKFSN--TTNTDKIGKGCPAMEDAAL 259
             ....:..||..:.|   |:.:.|.|....|.....:...:|..  ....:|........|.|..
Zfish   137 -GDGAQQAPSEEQSTFVKLEGIDQILPDDERMYQAGFMHRQFGAMLQPGVNKFSLRMFGSEKAVE 200

  Fly   260 SSEIRGSSVLCNRLSVDPTLQSHYRWLAIVSLAVLYNIIFVVGRAVFWEINKSAPAFWYTLDYLC 324
            ..:.|..|  .....:.|.....:.|..|:.|.::.|:|.:.....|:: ::..|| |...:.:.
Zfish   201 HEQERVKS--AGFWIIHPYSDFRFYWDLIMLLLMVGNLIIIPVGITFFK-DEHTPA-WIVFNVVS 261

  Fly   325 DFIYLLDTLVHMHEGFL--DQGLLVRDAFRLRRHYFHTKGWY-LDVLSMLPTDLAYIWWPPETCS 386
            |..:|:|.:::...|.:  |...::.|..:::..|.  :.|: :|.||.:|.|..::.......|
Zfish   262 DTFFLVDLVLNFRTGIVKEDSTEIILDPQQIKVRYL--RSWFAVDFLSSIPVDYIFLIVETRIDS 324

  Fly   387 SLYLPCPV--------IVRLNRLLRINRL------WE-----WFDRTETATGYPNAFRICKVVLA 432
            ..|.....        |:.|.||||::||      ||     .:|......      ||..::..
Zfish   325 DFYKTARALRIVRFTKILSLLRLLRLSRLIRYIHQWEEIFHMTYDLASAMV------RIVNLIGM 383

  Fly   433 ILVLIHWNACMYFAISYEIGFSSDSWVYNLNGTRNNTLQRQYIYSFYWSTLTLTTIG---ETPTP 494
            :|:|.||:.|:.|.:.....|.||.||.. |...|:|..:||.|:.:.:...:..||   ..|..
Zfish   384 MLLLCHWDGCLQFLVPMLQDFPSDCWVAK-NKMVNDTWGQQYSYALFKAMSHMLCIGYGMYPPVG 447

  Fly   495 ENDVEYLFVVADFLAGVLIFATIVGNIGSMISNMNVARVEFQNRMDGVKQYMAFRRVGHELEARV 559
            ..||  ...:...:.|...:|..||:..::|.:::.:|.::|.:...|:|||:|.::..::..|:
Zfish   448 MTDV--WLTILSMIVGATCYAMFVGHATALIQSLDSSRRQYQEKYKQVEQYMSFHKLPADMRQRI 510

  Fly   560 IRWFAYTWSQSGALDEERVLAALPDKLKAEIAIQVHMDTLKQVR---IFHDTEPGLLEALVLKLK 621
            ..::.:.: |....|||.:|..|.:.|:.||   :..:..|.|.   :|.:.:|..:.:::.||:
Zfish   511 HDYYEHRY-QGKMFDEESILGELNEPLREEI---ISFNCRKLVATMPLFANADPNFVTSMLTKLR 571

  Fly   622 LQVFSPGDYICRKGDVGKEMYIVKRGKLSVVGDDGITVLATLGA-------GSVFGEVSVLEIAG 679
            .:||.|||||.|:|.|||:||.::.|.|:|:         |.|:       ||.|||:.:|    
Zfish   572 FEVFQPGDYIIREGTVGKKMYFIQHGVLTVL---------TKGSKETKISDGSYFGEICLL---- 623

  Fly   680 NRTGNRRTANVRSLGYSDLFCLAKRDLWETLSDYPEAR----STLTQRGCQLLRKDGLLDEQIFA 740
              |..||||:||:..|..|:.|:.....|.|.:||..|    :....|..::.:::.:|..::..
Zfish   624 --TRGRRTASVRADTYCRLYSLSVDHFNEVLEEYPMMRRAFETVALDRLDRIGKRNSVLQHKVQR 686

  Fly   741 D 741
            |
Zfish   687 D 687

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CngANP_001188960.1 Ion_trans 309..529 CDD:278921 58/244 (24%)
Ion_trans_2 <477..527 CDD:285168 10/52 (19%)
Crp 598..>722 CDD:223736 46/137 (34%)
CAP_ED 604..717 CDD:237999 43/119 (36%)
CLZ 720..791 CDD:293134 3/22 (14%)
hcn4lXP_684730.5 Ion_trans_N 177..219 CDD:285597 7/43 (16%)
Ion_trans 239..484 CDD:278921 59/257 (23%)
Crp 548..>683 CDD:223736 47/149 (32%)
CAP_ED 554..662 CDD:237999 44/122 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170578281
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.840

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