DRSC/TRiP Functional Genomics Resources

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Protein Alignment CngA and sei

DIOPT Version :9

Sequence 1:NP_001188960.1 Gene:CngA / 36806 FlyBaseID:FBgn0261612 Length:840 Species:Drosophila melanogaster
Sequence 2:NP_001286814.1 Gene:sei / 37843 FlyBaseID:FBgn0003353 Length:855 Species:Drosophila melanogaster


Alignment Length:620 Identity:150/620 - (24%)
Similarity:273/620 - (44%) Gaps:109/620 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   183 QPNASDSSYVENGRKLIQEPSKRSKPSALRRTLQALRQRLTKRN------------------RPK 229
            :|...:::...||..|..:||:..|..:.::.::..:::|..:|                  |..
  Fly   164 KPMKGENAVETNGIPLESKPSQHKKQKSFKKCIKCDKKKLYIKNYQVSARRECDLLCSYDPLRKN 228

  Fly   230 PPDWFLE-------------KFSNTTN-TDKI-GKGCPAM--EDAAL--SSEIRGS------SVL 269
            ..|.|..             |::.... ||.: |.....|  ::|.|  .||.:|.      :.|
  Fly   229 NADLFQTHKGTSYECMFKNLKYNQAEKPTDNVMGNSYDDMLDKEALLGSKSEPKGQDPNDMITSL 293

  Fly   270 CNRLSVDPTLQSHYR--------------WLAIVSLAVLYNII-------FVVGRAVFWEIN--- 310
            ...:.:|..||::|.              |..|:.:.|:|..|       |::|...:...|   
  Fly   294 GGNILLDQKLQNNYYHKWTLLHYSPFKAVWDWIILILVMYTAIFTPYVAAFLLGEQDYQRRNSKY 358

  Fly   311 -KSAPAFWYTLDYLCDFIYLLDTLVHMHEGFLD-QGLLVRDAFRLRRHYFHTKGWYL-DVLSMLP 372
             .|.|.  ..:|.:.|..:::|.:::....|:: |..:|....|:..||.  .||:| |:::.:|
  Fly   359 INSDPI--VIIDLIVDVTFIVDIIINFRTTFVNSQDEVVSHPGRIAVHYL--SGWFLIDLVAAVP 419

  Fly   373 TDLAYIWWPPETCSSLYLPCPVIVRLNRLLRINRLWEWFDRTETATGYPNAFRICKVVLAILVLI 437
            .||..:....:..::|.    .:::..||||:.|:....||   .:.|..|..|  :::|..:||
  Fly   420 FDLLLVGSDTDETTTLI----GLLKTARLLRLVRVARKIDR---YSEYGAAVLI--LLMATFILI 475

  Fly   438 -HWNACMYFAI--------SYEIGFSSDSWVYNL------NGTRNNTLQRQYIYSFYWSTLTLTT 487
             ||.||:::||        |..||: .:|..|::      |.|...:::.:||.:.|::..:||:
  Fly   476 AHWLACIWYAIGNAEKSIASKNIGW-LNSLAYDIQEPYFDNRTGGPSIKSRYITALYFTFTSLTS 539

  Fly   488 IG-ETPTPENDVEYLFVVADFLAGVLIFATIVGNIGSMISNMNVARVEFQNRMDGVKQYMAFRRV 551
            :| ....|..|.|..|.:...|.|.|::|:|.||:.::|..:......:..:|..|::::.|.::
  Fly   540 VGFGNVAPNTDAEKAFTICVMLVGSLMYASIFGNVSAIIQRLYSGTARYHTQMLRVREFIRFHQI 604

  Fly   552 GHELEARVIRWFAYTWSQSGALDEERVLAALPDKLKAEIAIQVHMDTLKQVRIFHDTEPGLLEAL 616
            .:.|..|:..:|.:.|:.:..:|...:|...|:.|:|:|.:.::...|.....|.:..||.|.|.
  Fly   605 PNPLRQRLEEYFQHAWTYTNGIDMNSLLKGFPECLQADICLHLNRKLLTTCAAFSEASPGCLRAF 669

  Fly   617 VLKLKLQVFSPGDYICRKGDVGKEMYIVKRGKLSVVGDDGITVLATLGAGSVFGE-VSVLEIAGN 680
            .||.|.....|||.:..:|||...:|.:.||.:.:.....|.|   ||...:||| ..:....|.
  Fly   670 SLKFKTTHAPPGDILVHRGDVLTSLYFIARGSIEIQRAGNIVV---LGKNDIFGENPCIYPTVGK 731

  Fly   681 RTGNRRTANVRSLGYSDLFCLAKRDLWETLSDYPE 715
            ..|     .||:|.|.|:..|.:.||.:.|..|||
  Fly   732 SNG-----VVRALTYCDIHKLHRDDLLDVLDSYPE 761

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CngANP_001188960.1 Ion_trans 309..529 CDD:278921 64/241 (27%)
Ion_trans_2 <477..527 CDD:285168 16/50 (32%)
Crp 598..>722 CDD:223736 39/119 (33%)
CAP_ED 604..717 CDD:237999 38/113 (34%)
CLZ 720..791 CDD:293134
seiNP_001286814.1 Ion_trans 360..583 CDD:278921 63/236 (27%)
Ion_trans_2 <526..580 CDD:285168 18/53 (34%)
CAP_ED 657..767 CDD:237999 38/113 (34%)
Crp 666..>766 CDD:223736 35/104 (34%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45445384
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm987
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.840

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