DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CngA and CG42260

DIOPT Version :9

Sequence 1:NP_001188960.1 Gene:CngA / 36806 FlyBaseID:FBgn0261612 Length:840 Species:Drosophila melanogaster
Sequence 2:NP_001356969.1 Gene:CG42260 / 37614 FlyBaseID:FBgn0259145 Length:1269 Species:Drosophila melanogaster


Alignment Length:905 Identity:287/905 - (31%)
Similarity:417/905 - (46%) Gaps:204/905 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 PKYGYNLSNRPMYRTTRLVGPASSAPAQLQLPC-----GSHQATLGVAPPPLEEISGGLFAPFAP 88
            ||:|.::|.:..:          ::...|..||     .||.||:..|                 
  Fly   359 PKFGQSVSQQGFF----------TSHDSLATPCASRASNSHMATVSTA----------------- 396

  Fly    89 TATITVEQAATSIPMAVDGEVHHLHYPRR-------------------SWQRKYRQGI--HRQPG 132
                              .|:..||..:|                   :|.|...:|.  :...|
  Fly   397 ------------------SEMDLLHNKQRNKSRGRLKTAASGDQPLLGTWNRSTGRGSQDNTLAG 443

  Fly   133 GGAEQDEDEEEDDDDVDEDDDDEFGASVCEDNPEEAIARAD----HDTQQKQHYQPNASDSSYVE 193
            |||          ..:.....:::|.:.|........:|:.    |:..|:.|:......|:...
  Fly   444 GGA----------TSLAMGGHNQYGGNYCNGTDRYPRSRSQQQGHHNAAQQAHHPYQLQHSASTV 498

  Fly   194 NGRKLIQEPSKRSKPSALRRTLQALRQRLTKRNRPKPPDWFLEKFSNTTNTDKIGKGCPAMEDA- 257
            :.......|..:..|..                 |.||........:.......|...|..... 
  Fly   499 SHHPHAHGPPSQGGPGG-----------------PGPPHGGHPHHPHHGGAGSGGGSGPGSHGGQ 546

  Fly   258 --------ALSSEIRGSSVLCNRLS--VDPTLQSHYRWLAIVSLAVLYNIIFVVGRAVFWEINKS 312
                    ..|..||.::. ..:|.  .||..:..|.|..:||:|.|||...::.|..|.|||:.
  Fly   547 PHHQKPRRTASQRIRAATA-ARKLHFVFDPAGRLCYYWSMVVSMAFLYNFWVIIYRFAFQEINRR 610

  Fly   313 APAFWYTLDYLCDFIYLLDTLVHMHEGFLDQGLLVRDAFRLRRHYFHTKGWYLDVLSMLPTDLAY 377
            ..|.|:.||||.||:||:|.|.|...|:|:.|:|..||.:||.||.::..:|:|.|.:||.|..|
  Fly   611 TIAIWFCLDYLSDFLYLIDILFHFRTGYLEDGVLQTDALKLRTHYMNSTIFYIDCLCLLPLDFLY 675

  Fly   378 IWWPPETCSSLYLPCPVIVRLNRLLRINRLWEWFDRTETATGYPNAFRICKVVLAILVLIHWNAC 442
                      |.:....|:|..||::|.|.|.:.||||..|.|||.||...::..:||:.|||.|
  Fly   676 ----------LSIGFNSILRSFRLVKIYRFWAFMDRTERHTNYPNLFRSTALIHYLLVIFHWNGC 730

  Fly   443 MYFAISYEIGFSSDSWVYNLNGTRNNTLQRQYIYSFYWSTLTLTTIGETPTPENDVEYLFVVADF 507
            :|..|....||.|.:|||  :.:.:..:.:||:.|:||.||.|||||:.|.|.:..||:||:...
  Fly   731 LYHIIHKNNGFGSRNWVY--HDSESADVVKQYLQSYYWCTLALTTIGDLPKPRSKGEYVFVILQL 793

  Fly   508 LAGVLIFATIVGNIGSMISNMNVARVEFQNRMDGVKQYMAFRRVGHELEARVIRWFAYTWSQSGA 572
            |.|:::|||::|::.:::::::.||.|||.::||||.||..|||.:.|:.:||:||.|.|.....
  Fly   794 LFGLMLFATVLGHVANIVTSVSAARKEFQAKLDGVKTYMRMRRVPNHLQVKVIKWFDYLWLTQKC 858

  Fly   573 LDEERVLAALPDKLKAEIAIQVHMDTLKQVRIFHDTEPGLLEALVLKLKLQVFSPGDYICRKGDV 637
            .||||.::.|||||||||||.||:||||:|.||.:||.|.|..|||:|:..:|||||||||||:|
  Fly   859 SDEERAVSCLPDKLKAEIAINVHLDTLKRVEIFQNTEAGFLCELVLRLRPVLFSPGDYICRKGEV 923

  Fly   638 GKEMYIVKRGKLSVVGDDGITVLATLGAGSVFGEVSVLEIAGNRTGNRRTANVRSLGYSDLFCLA 702
            |||||||.||:|.||.|:|.||:|:|.|||.|||:|:|.:  ...||||||:|||:||||||.|:
  Fly   924 GKEMYIVNRGRLQVVADNGKTVMASLKAGSYFGEISILNM--GTAGNRRTASVRSVGYSDLFVLS 986

  Fly   703 KRDLWETLSDYPEAR-------------------------STLTQRGCQ---------------- 726
            |:|:|:.|.:||.||                         :.:....||                
  Fly   987 KKDMWDVLKEYPAARVRLESIAVKRLEKYKKAPLEKVKYFNVVAMGRCQSTPGLVESCGRTSLEE 1051

  Fly   727 ------------LLRKDGLLDEQIFADSQRVH--DSIEGGIEKLELSVENLNMRLARLLAEYTAS 777
                        |:.....|.:|..|..|:.|  :|.:...:....|..:...||||.    |.|
  Fly  1052 MWLPPATAGASSLMHHHQALQQQHQASQQQPHRQESTQTSSQTHGYSPRSYADRLARA----TDS 1112

  Fly   778 QAKIKQRLAKLEMNGGPGTWRLECEPQSRARSGRLYSLQPKRRPRSRPDATAKSSDAAKQ 837
            ...:           .|.....|..|:||..|.  :|:    ||:|:|..|....|::.|
  Fly  1113 PRSV-----------SPSAHGSEERPRSRTTSH--HSI----RPQSQPSHTGHICDSSSQ 1155

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CngANP_001188960.1 Ion_trans 309..529 CDD:278921 88/219 (40%)
Ion_trans_2 <477..527 CDD:285168 22/49 (45%)
Crp 598..>722 CDD:223736 76/148 (51%)
CAP_ED 604..717 CDD:237999 70/112 (63%)
CLZ 720..791 CDD:293134 16/100 (16%)
CG42260NP_001356969.1 Ion_trans 581..819 CDD:334124 100/249 (40%)
CAP_ED 890..1004 CDD:237999 72/115 (63%)
DUF4655 1084..>1154 CDD:317882 21/90 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 53 1.000 Domainoid score I4197
eggNOG 1 0.900 - - E1_KOG0500
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1073751at2759
OrthoFinder 1 1.000 - - FOG0000167
OrthoInspector 1 1.000 - - mtm987
orthoMCL 1 0.900 - - OOG6_100817
Panther 1 1.100 - - P PTHR45638
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
87.820

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