DRSC/TRiP Functional Genomics Resources

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Protein Alignment CngA and KCNH2

DIOPT Version :10

Sequence 1:NP_001188960.1 Gene:CngA / 36806 FlyBaseID:FBgn0261612 Length:840 Species:Drosophila melanogaster
Sequence 2:XP_047276304.1 Gene:KCNH2 / 3757 HGNCID:6251 Length:1185 Species:Homo sapiens


Alignment Length:914 Identity:208/914 - (22%)
Similarity:343/914 - (37%) Gaps:225/914 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 SPKYGYNLSNRPMYRTTRLVGPASSAPAQLQLPCGSHQATLGVAPPPLEEISGGLFAPFAPTATI 92
            ||.:..|....|    |..:.|..:...:|:||     |.|.:........|||.....||.|.:
Human   166 SPAHDTNHRGPP----TSWLAPGRAKTFRLKLP-----ALLALTARESSVRSGGAGGAGAPGAVV 221

  Fly    93 ----------TVEQAATSIPMAVDGEVHHLHYPRRSWQRKYRQGIHRQPGGGAEQDEDEEEDDDD 147
                      :.|..|.....|:|..|..|                    |.||           
Human   222 VDVDLTPAAPSSESLALDEVTAMDNHVAGL--------------------GPAE----------- 255

  Fly   148 VDEDDDDEFGASVCEDNPEEAIARADHDTQQKQHYQPNASDSSYVENGRKLIQEPSKRSKPSALR 212
                   |..|.|...:|..: |.....:.:.....|:||.||.     .|.:..|:.|..|..|
Human   256 -------ERRALVGPGSPPRS-APGQLPSPRAHSLNPDASGSSC-----SLARTRSRESCASVRR 307

  Fly   213 RT----LQALRQRLTKRNRPKPP--------------------DWFLEKFSNTTNTDKIG----- 248
            .:    ::|:|..:.    |.||                    |..|.::...:...:|.     
Human   308 ASSADDIEAMRAGVL----PPPPRHASTGAMHPLRSGLLNSTSDSDLVRYRTISKIPQITLNFVD 368

  Fly   249 -KGCPAMEDAALSSEI--------------RGSSVLCNRLSVDP--TLQS---------HYR--- 284
             ||.|.:.......||              :.:.||.....|.|  .||:         ||.   
Human   369 LKGDPFLASPTSDREIIAPKIKERTHNVTEKVTQVLSLGADVLPEYKLQAPRIHRWTILHYSPFK 433

  Fly   285 --WLAIVSLAVLYNIIFVVGRAVFW--EINKSAPAF--------WYTLDYLCDFIYLLDTLVHMH 337
              |..::.|.|:|..:|....|.|.  |..:..||.        ...:|.:.|.::::|.|::..
Human   434 AVWDWLILLLVIYTAVFTPYSAAFLLKETEEGPPATECGYACQPLAVVDLIVDIMFIVDILINFR 498

  Fly   338 EGFLDQG-LLVRDAFRLRRHYFHTKGWYL-DVLSMLPTDLAYIWWPPETCSSLYLPCPVIVRLNR 400
            ..:::.. .:|....|:..|||  |||:| |:::.:|.||.......|....|       ::..|
Human   499 TTYVNANEEVVSHPGRIAVHYF--KGWFLIDMVAAIPFDLLIFGSGSEELIGL-------LKTAR 554

  Fly   401 LLRINRLWEWFDRTETATGYPNAFRICKVVLAILVLIHWNACMYFAISYEIGFSSDS---WVYNL 462
            |||:.|:....||............:|...|    :.||.||:::||........||   |::||
Human   555 LLRLVRVARKLDRYSEYGAAVLFLLMCTFAL----IAHWLACIWYAIGNMEQPHMDSRIGWLHNL 615

  Fly   463 ----------NGTRNNTLQRQYIYSFYWSTLTLTTIG-ETPTPENDVEYLFVVADFLAGVLIFAT 516
                      :|....:::.:|:.:.|::..:||::| ...:|..:.|.:|.:...|.|.|::|:
Human   616 GDQIGKPYNSSGLGGPSIKDKYVTALYFTFSSLTSVGFGNVSPNTNSEKIFSICVMLIGSLMYAS 680

  Fly   517 IVGNIGSMISNMNVARVEFQNRMDGVKQYMAFRRVGHELEARVIRWFAYTWSQSGALDEERVLAA 581
            |.||:.::|..:......:..:|..|::::.|.::.:.|..|:..:|.:.||.:..:|...||..
Human   681 IFGNVSAIIQRLYSGTARYHTQMLRVREFIRFHQIPNPLRQRLEEYFQHAWSYTNGIDMNAVLKG 745

  Fly   582 LPDKLKAEIAIQVHMDTLKQVRIFHDTEPGLLEALVLKLKLQVFSPGDYICRKGDVGKEMYIVKR 646
            .|:.|:|:|.:.::...|:..:.|.....|.|.||.:|.|.....|||.:...||:...:|.:.|
Human   746 FPECLQADICLHLNRSLLQHCKPFRGATKGCLRALAMKFKTTHAPPGDTLVHAGDLLTALYFISR 810

  Fly   647 GKLSVVGDDGITVLATLGAGSVFGE-VSVLEIAGNRTGNRRTANVRSLGYSDLFCLAKRDLWETL 710
            |.:.::..|  .|:|.||...:||| :::....|...|     :||:|.|.||..:.:.||.|.|
Human   811 GSIEILRGD--VVVAILGKNDIFGEPLNLYARPGKSNG-----DVRALTYCDLHKIHRDDLLEVL 868

  Fly   711 SDYPEARSTLTQRGCQLLRKDGLLDEQIFAD----------SQRVHDSIEGGIEKLELSVENLNM 765
            ..|||                       |:|          :.|..:.|.|.....||.......
Human   869 DMYPE-----------------------FSDHFWSSLEITFNLRDTNMIPGSPGSTELEGGFSRQ 910

  Fly   766 RLARLLAEYTASQAKIKQRLAK-LEMNG-----GPGTWRLECEPQSRARSGRLYSLQPKRRPRSR 824
            |..:|         ..::|..| .|..|     |||  |....|.||.|.|..:...|...| |.
Human   911 RKRKL---------SFRRRTDKDTEQPGEVSALGPG--RAGAGPSSRGRPGGPWGESPSSGP-SS 963

  Fly   825 PDAT 828
            |:::
Human   964 PESS 967

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CngANP_001188960.1 Ion_trans 282..529 CDD:459842 68/277 (25%)
CAP_ED 604..717 CDD:237999 38/113 (34%)
CLZ 720..790 CDD:465160 11/80 (14%)
KCNH2XP_047276304.1 PAS_9 64..156 CDD:463873
Ion_trans 435..694 CDD:459842 66/271 (24%)
CAP_ED 768..879 CDD:237999 40/140 (29%)
Blue background indicates that the domain is not in the aligned region.

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