DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CngA and Ih

DIOPT Version :9

Sequence 1:NP_001188960.1 Gene:CngA / 36806 FlyBaseID:FBgn0261612 Length:840 Species:Drosophila melanogaster
Sequence 2:NP_001033948.1 Gene:Ih / 36589 FlyBaseID:FBgn0263397 Length:1327 Species:Drosophila melanogaster


Alignment Length:827 Identity:185/827 - (22%)
Similarity:323/827 - (39%) Gaps:196/827 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 NRPMYRTTRLVGPASSAPAQLQLPCGSHQATLGVAPPPLEEISGGLFAPFAPTATITVEQAATSI 101
            ||.:...|.....:||..:|.:   ||.:|..|..|              ...:||||..|..|.
  Fly   503 NRQLSAPTDYTHHSSSNGSQQE---GSSEANEGHEP--------------VGESTITVASAGVSY 550

  Fly   102 PMAVDGEVHHLH---------------------------YPRR--------SWQRKYRQGIHRQP 131
            |.......|:.|                           ||.|        |:.|::   |.|..
  Fly   551 PHPYSYPYHYAHHASSATAPANLKASLQLHSFGSHHPCPYPARPTSTSCTNSFNRRH---IRRHK 612

  Fly   132 G--GGAEQDEDEEEDDD-------DVDEDDDDEFGASVCEDN-----PEEAIARADHDTQQ---- 178
            |  |......|.||...       :|:::|......:.|.|:     .:||:...|..|:.    
  Fly   613 GKLGDRLLSGDSEESVRCSYCSVLNVNDNDLRISFENTCTDSLVTAFDDEALLICDQGTEMVHFD 677

  Fly   179 --------KQHYQPNASDSSYVENGRKLIQEPSKRSKPSALRRTLQALRQRLTKRNRPKPPDWFL 235
                    |:...||             |...|::...:.|:..||:               |  
  Fly   678 DVSLYGTPKEEPMPN-------------IPIVSEKVSANFLKSQLQS---------------W-- 712

  Fly   236 EKFSNTTNTDKIGKGCPAMEDAALSSEIRGSSVLCNRLSVDPTLQSHYRW-LAIVSLAVLYNIIF 299
              |..|.|  ::.........|.:...||..:  .....:.|.....:.| |.::.|.|...||.
  Fly   713 --FQPTDN--RLAMKLFGSRKALVKERIRQKT--SGHWVIHPCSSFRFYWDLCMLLLLVANLIIL 771

  Fly   300 VVGRAVFWEINKSAPAFWYTLDYLCDFIYLLDTLVHMHEGFLDQG---LLVRDAFRLRRHYFHTK 361
            .|..:.|   |......|...:.|.|.|:|:|.:|:...|.:.|.   .::.|...:.:||..| 
  Fly   772 PVAISFF---NDDLSTRWIAFNCLSDTIFLIDIVVNFRTGIMQQDNAEQVILDPKLIAKHYLRT- 832

  Fly   362 GW-YLDVLSMLPTDLAYIWWP--------PETCSSLY-------LPCPVIVRLNRLLRINRL--- 407
             | :||::|.:|.|..::.:.        .::...|:       |....::.|.||||::||   
  Fly   833 -WFFLDLISSIPLDYIFLIFNQIMKLQDFSDSFQILHAGRALRILRLAKLLSLVRLLRLSRLVRY 896

  Fly   408 ---WEWF-------DRTETATGYPNA----------------------FRICKVVLAILVLIHWN 440
               ||..       .::....|..|.                      .||..::..:|::.||:
  Fly   897 VSQWEEVYILQNLQKKSADRRGRMNRKDKDGLTKSNLILKFLNMASVFMRIFNLICMMLLIGHWS 961

  Fly   441 ACMYFAISYEIGFSSDSWVYNLNGTRNNTLQRQYIYSFY--WSTLTLTTIGETPTPENDVEYLFV 503
            .|:.|.:....||.|:||| ::|..:.:....||.::.:  .|.:.....|..| |::..:....
  Fly   962 GCLQFLVPMLQGFPSNSWV-SINELQESYWLEQYSWALFKAMSHMLCIGYGRFP-PQSLTDMWLT 1024

  Fly   504 VADFLAGVLIFATIVGNIGSMISNMNVARVEFQNRMDGVKQYMAFRRVGHELEARVIRWFAYTWS 568
            :...::|...:|..:|:..::|.:::.:|.:::.::..|::|||:|::..::..|:..:|.:.: 
  Fly  1025 MLSMISGATCYALFLGHATNLIQSLDSSRRQYREKVKQVEEYMAYRKLPRDMRQRITEYFEHRY- 1088

  Fly   569 QSGALDEERVLAALPDKLKAEIAIQVHMDTLKQVRIFHDTEPGLLEALVLKLKLQVFSPGDYICR 633
            |....|||.:|..|.:||:.::........:..|..|.:.:...:..:|.|||.:||.|||.|.:
  Fly  1089 QGKFFDEELILGELSEKLREDVINYNCRSLVASVPFFANADSNFVSDVVTKLKYEVFQPGDIIIK 1153

  Fly   634 KGDVGKEMYIVKRGKLSVVGDDGITVLATLGAGSVFGEVSVLEIAGNRTGNRRTANVRSLGYSDL 698
            :|.:|.:||.::.|.:.:|..:| .|..:|..||.|||:.:|      |..||.|:||:..|.:|
  Fly  1154 EGTIGTKMYFIQEGVVDIVMANG-EVATSLSDGSYFGEICLL------TNARRVASVRAETYCNL 1211

  Fly   699 FCLAKRDLWETLSDYPEARSTLTQRGCQLLRKDG-------LLDEQI 738
            |.|:.......|..||..|.|:.....:.|.|.|       ..|||:
  Fly  1212 FSLSVDHFNCVLDQYPLMRKTMETVAAERLNKIGKNPNIMHQKDEQL 1258

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CngANP_001188960.1 Ion_trans 309..529 CDD:278921 57/275 (21%)
Ion_trans_2 <477..527 CDD:285168 8/51 (16%)
Crp 598..>722 CDD:223736 42/123 (34%)
CAP_ED 604..717 CDD:237999 39/112 (35%)
CLZ 720..791 CDD:293134 6/26 (23%)
IhNP_001033948.1 Ion_trans_N 709..751 CDD:285597 10/64 (16%)
Ion_trans 771..1054 CDD:278921 59/289 (20%)
Crp 1118..>1241 CDD:223736 42/129 (33%)
CAP_ED 1124..1233 CDD:237999 40/115 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45445383
Domainoid 1 1.000 45 1.000 Domainoid score I4624
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1073751at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm987
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.850

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