DRSC/TRiP Functional Genomics Resources

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Protein Alignment CngA and Kcnh7

DIOPT Version :10

Sequence 1:NP_001188960.1 Gene:CngA / 36806 FlyBaseID:FBgn0261612 Length:840 Species:Drosophila melanogaster
Sequence 2:XP_006234331.1 Gene:Kcnh7 / 170739 RGDID:621112 Length:1203 Species:Rattus norvegicus


Alignment Length:757 Identity:188/757 - (24%)
Similarity:325/757 - (42%) Gaps:141/757 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    84 APFAPTATITVEQAATSIPMA-VDGEVHHLHYPRRSWQRKYRQGIHRQPGGGAEQDEDEEEDDDD 147
            :|.....|..:.|.:...|:. :.|.:.| ..|:|.|.|.|               .|..:....
  Rat   209 SPSEADDTKALIQPSQCSPLVNISGPLDH-SSPKRQWDRLY---------------PDMLQSSSQ 257

  Fly   148 VDEDDDDEFGASVCEDNPEEAIARAD--HDTQQKQHYQPN------ASDSSYVENGRK------- 197
            :......|   |:|      :|.||.  ||.:....:..|      ||:    :|||.       
  Rat   258 LTHSRSRE---SLC------SIRRASSVHDIEGFNVHPKNIFRDRHASE----DNGRNVKVSRSW 309

  Fly   198 LIQEPSKRSKPSALRRTLQALRQRLTKRNRPKPPDWFLEKFSNTTNTDKIGKGCPAMEDAALSSE 262
            :...|....|.|.|..|..:...:.:..|  |.|...| .||: ..|:|.....|:.:...::.:
  Rat   310 MAGGPFNHIKSSLLGSTSDSNLNKYSTIN--KIPQLTL-NFSD-VKTEKKNTSPPSSDKTIIAPK 370

  Fly   263 IR----------------GSSVLCNRLSVDPTLQS----HYR-----WLAIVSLAVLYNIIFVVG 302
            ::                |:.||.......|.:..    ||.     |..::.|.|:|..||...
  Rat   371 VKERTHNVTEKVTQVLSLGADVLPEYKLQTPRINKFTILHYSPFKAVWDWLILLLVIYTAIFTPY 435

  Fly   303 RAVFW----------EINKSAPAFWYTLDYLCDFIYLLDTLVHMHEGFLDQG-LLVRDAFRLRRH 356
            .|.|.          |...|.... ..:|.:.|.::::|.|::....:::|. .:|.|..::..|
  Rat   436 SAAFLLNDREEQKRRECGYSCSPL-NVVDLIVDIMFIIDILINFRTTYVNQNEEVVSDPAKIAVH 499

  Fly   357 YFHTKGWYL-DVLSMLPTDLAYIWWPPETCSSLYLPCPVIVRLNRLLRINRLWEWFDRTETATGY 420
            ||  |||:| |:::.:|.||.......:..::|.    .:::..||||:.|:....||   .:.|
  Rat   500 YF--KGWFLIDMVAAIPFDLLIFGSGSDETTTLI----GLLKTARLLRLVRVARKLDR---YSEY 555

  Fly   421 PNAFRICKVVLAILVLI-HWNACMYFAI-SYEIGFSSD--SWVYNLN---GTRNN--------TL 470
            ..|  :..:::.|..|| ||.||:::|| :.|..:.:|  .|:.:|.   |.|.|        ::
  Rat   556 GAA--VLMLLMCIFALIAHWLACIWYAIGNVERPYLTDKIGWLDSLGTQIGKRYNDSDSSSGPSI 618

  Fly   471 QRQYIYSFYWSTLTLTTIG-ETPTPENDVEYLFVVADFLAGVLIFATIVGNIGSMISNMNVARVE 534
            :.:|:.:.|::..:||::| ...:|..:.|.:|.:...|.|.|::|:|.||:.::|..:......
  Rat   619 KDKYVTALYFTFSSLTSVGFGNVSPNTNSEKIFSICVMLIGSLMYASIFGNVSAIIQRLYSGTAR 683

  Fly   535 FQNRMDGVKQYMAFRRVGHELEARVIRWFAYTWSQSGALDEERVLAALPDKLKAEIAIQVHMDTL 599
            :..:|..||:::.|.::.:.|..|:..:|.:.|:.:..:|...||...|:.|:|:|.:.::...|
  Rat   684 YHMQMLRVKEFIRFHQIPNPLRQRLEEYFQHAWTYTNGIDMNMVLKGFPECLQADICLHLNQTLL 748

  Fly   600 KQVRIFHDTEPGLLEALVLKLKLQVFSPGDYICRKGDVGKEMYIVKRGKLSVVGDDGITVLATLG 664
            :..:.|.....|.|.||.:|.|.....|||.:...|||...:|.:.||.:.::.||  .|:|.||
  Rat   749 QNCKAFRGASKGCLRALAMKFKTTHAPPGDTLVHCGDVLTALYFLSRGSIEILKDD--IVVAILG 811

  Fly   665 AGSVFGEVSVLEIAGNRTGNRRTANVRSLGYSDLFCLAKRDLWETLSDYPE------ARSTLTQR 723
            ...:|||:..|.....::    .|:||:|.|.||..:.:.||.|.|..|||      ....||..
  Rat   812 KNDIFGEMVHLYAKPGKS----NADVRALTYCDLHKIQREDLLEVLDMYPEFSDHFLTNLELTFN 872

  Fly   724 GCQLLRKDGLLDEQIFADSQRVHDSIEGGIEKL---ELSVEN 762
                ||.:.       |.||.::|| ||...||   .||.|:
  Rat   873 ----LRHES-------AKSQSINDS-EGDTCKLRRRRLSFES 902

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CngANP_001188960.1 Ion_trans 282..529 CDD:459842 72/279 (26%)
CAP_ED 604..717 CDD:237999 40/118 (34%)
CLZ 720..790 CDD:465160 16/46 (35%)
Kcnh7XP_006234331.1 PAS_9 38..134 CDD:463873
Ion_trans 417..679 CDD:459842 70/273 (26%)
CAP_ED 753..864 CDD:237999 40/116 (34%)
Blue background indicates that the domain is not in the aligned region.

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