DRSC/TRiP Functional Genomics Resources

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Protein Alignment CngA and Hcn3

DIOPT Version :10

Sequence 1:NP_001188960.1 Gene:CngA / 36806 FlyBaseID:FBgn0261612 Length:840 Species:Drosophila melanogaster
Sequence 2:NP_032253.1 Gene:Hcn3 / 15168 MGIID:1298211 Length:779 Species:Mus musculus


Alignment Length:603 Identity:155/603 - (25%)
Similarity:266/603 - (44%) Gaps:97/603 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   275 VDPTLQSHYRWLAIVSLAVLYNIIFVVGRAVFWEINKSAPAFWYTLDYLCDFIYLLDTLVHMHEG 339
            :.|.....:.|..|:.|.::.|:|.:.....|::...|.|  |...:.|.|..:|||.:::...|
Mouse    85 IHPYSDFRFYWDLIMLLLMVGNLIVLPVGITFFKEENSPP--WIVFNVLSDTFFLLDLVLNFRTG 147

  Fly   340 F-LDQG---LLVRDAFRLRRHYFHTKGWYL-DVLSMLPTDLAY--IWWPPETCSSLYLPCPV--- 394
            . :::|   ||...|.|.|  |..|  |:| |::|.:|.|..:  :...|...:.:|.....   
Mouse   148 IVVEEGAEILLAPRAIRTR--YLRT--WFLVDLISSIPVDYIFLVVELEPRLDAEVYKTARALRI 208

  Fly   395 -----IVRLNRLLRINRL------WE-----WFDRTETATGYPNAFRICKVVLAILVLIHWNACM 443
                 |:.|.||||::||      ||     .:|......      ||..::..:|:|.||:.|:
Mouse   209 VRFTKILSLLRLLRLSRLIRYIHQWEEIFHMTYDLASAVV------RIFNLIGMMLLLCHWDGCL 267

  Fly   444 YFAISYEIGFSSDSWVYNLNGTRNNTLQRQYIYSFYWSTLTLTTIG---ETPTPENDVEYLFVVA 505
            .|.:.....|.||.|| ::|...|::..|||.::.:.:...:..||   :.|....||  ...:.
Mouse   268 QFLVPMLQDFPSDCWV-SMNRMVNHSWGRQYSHALFKAMSHMLCIGYGQQAPVGMPDV--WLTML 329

  Fly   506 DFLAGVLIFATIVGNIGSMISNMNVARVEFQNRMDGVKQYMAFRRVGHELEARVIRWFAYTWSQS 570
            ..:.|...:|..:|:..::|.:::.:|.::|.:...|:|||:|.::..:...|:..::.:.: |.
Mouse   330 SMIVGATCYAMFIGHATALIQSLDSSRRQYQEKYKQVEQYMSFHKLPADTRQRIHEYYEHRY-QG 393

  Fly   571 GALDEERVLAALPDKLKAEI------AIQVHMDTLKQVRIFHDTEPGLLEALVLKLKLQVFSPGD 629
            ...|||.:|..|.:.|:.||      .:..||.      :|...:|..:.|::.||:.:||.|||
Mouse   394 KMFDEESILGELSEPLREEIINFTCRGLVAHMP------LFAHADPSFVTAVLTKLRFEVFQPGD 452

  Fly   630 YICRKGDVGKEMYIVKRGKLSVVG----DDGITVLATLGAGSVFGEVSVLEIAGNRTGNRRTANV 690
            .:.|:|.||::||.::.|.|||:.    |..:|      .||.|||:.:|      |..||||:|
Mouse   453 LVVREGSVGRKMYFIQHGLLSVLARGARDTRLT------DGSYFGEICLL------TRGRRTASV 505

  Fly   691 RSLGYSDLFCLAKRDLWETLSDYPEARSTLTQRGCQLLRKDGLLDEQIFADSQRVHDSIEGGIEK 755
            |:..|..|:.|:.......|.::|..|..........||:.|..:..:............||:.:
Mouse   506 RADTYCRLYSLSVDHFNAVLEEFPMMRRAFETVAMDRLRRIGKKNSILQRKRSEPSPGSSGGVME 570

  Fly   756 LELSVENLNM-RLARLLAEYTASQAKIKQRLAKLEMNGGPGTWRLECEPQSRA-------RSGRL 812
            ..|...:.:| |..|.||..|.::           ::|.|..|    ||...|       .|...
Mouse   571 QHLVQHDRDMARGVRGLAPGTGAR-----------LSGKPVLW----EPLVHAPLQAAAVTSNVA 620

  Fly   813 YSLQPKRRPRS-RPDATA 829
            .:|..:|.|.. .||:.|
Mouse   621 IALTHQRGPLPLSPDSPA 638

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CngANP_001188960.1 Ion_trans 282..529 CDD:459842 69/275 (25%)
CAP_ED 604..717 CDD:237999 40/116 (34%)
CLZ 720..790 CDD:465160 12/70 (17%)
Hcn3NP_032253.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..47
Involved in subunit assembly. /evidence=ECO:0000250 45..90 1/4 (25%)
Ion_trans_N 48..90 CDD:400630 1/4 (25%)
Ion_trans 92..357 CDD:459842 69/279 (25%)
Interaction with KCTD3. /evidence=ECO:0000269|PubMed:23382386 353..779 85/320 (27%)
CAP_ED 427..535 CDD:237999 41/119 (34%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 549..569 2/19 (11%)
PHA03247 <585..773 CDD:223021 17/69 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 687..779
Blue background indicates that the domain is not in the aligned region.

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