DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CngA and hcn4

DIOPT Version :9

Sequence 1:NP_001188960.1 Gene:CngA / 36806 FlyBaseID:FBgn0261612 Length:840 Species:Drosophila melanogaster
Sequence 2:XP_002944030.2 Gene:hcn4 / 100498501 XenbaseID:XB-GENE-940130 Length:2061 Species:Xenopus tropicalis


Alignment Length:771 Identity:178/771 - (23%)
Similarity:313/771 - (40%) Gaps:146/771 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 LVGPASSAPAQLQLPCGSHQATLGVAP---PPLEEISGGLFAPFAPTATITVEQAATSIPMAVDG 107
            :|...|||.|..|.|        .:||   |.|.........|..|.|.|:.|.           
 Frog  1033 VVPSQSSALASSQSP--------ALAPSQSPALAPSQSPALVPTQPAAVISSES----------- 1078

  Fly   108 EVHHLHYPRRSWQRKYRQGIHRQPGGGAEQDEDEEEDDDDVDEDDDDEFGASVCEDNPEEAIARA 172
                   |.:...:...||....|..|:.|...:|.....          |.|    |.:.....
 Frog  1079 -------PAQGPSQSPFQGSCHVPTQGSIQSPAQEPSQSP----------AKV----PSQCPLHV 1122

  Fly   173 DHDTQQKQHYQPNASDSSYVENGRKLIQEPSKRSKPSALRRTLQALRQRL---------TKRNRP 228
            ......:...|..|.||..: ..:...|.|::.|..|..:.:.|:..|.|         :::...
 Frog  1123 PSQCPVRVPTQATAQDSCPL-TAQAPSQSPAQISSHSPAQISSQSPAQELSSLIPKLEGSEQTEV 1186

  Fly   229 KPPDWFLEKFSNTTNTDKIGKGCPAMEDAALSSEIR-------GSSVLCNRLSVDPTLQSHYRWL 286
            ..|..|:::.........:.|....|..:..:.||.       ||.:      :.|.....:.|.
 Frog  1187 GDPGGFIQRQFGALLQPAVNKFSLRMFGSHKAVEIEQQRVKSAGSWI------IHPYSDFRFYWD 1245

  Fly   287 AIVSLAVLYNIIFVVGRAVFWEINKSAPAFWYTLDYLCDFIYLLDTLVHMHEGFL--DQGLLVRD 349
            .|:.|.::.|:|.:.....|::...:.|  |...:.|.|..:|.|.:::...|.:  |...::.|
 Frog  1246 LIMLLLMVANLIILPVGITFFKDENTPP--WIVFNVLSDTFFLADLVLNFRTGIVVEDNTEIILD 1308

  Fly   350 AFRLRRHYFHTKGWYL-DVLSMLPTDLAYIWWPPET--CSSLYLPCPV--------IVRLNRLLR 403
            ...::..|.  |.|:| |.:|.:|.|..::....||  .:.:|.....        |:.|.||||
 Frog  1309 PHTIKMKYL--KSWFLVDFVSSIPVDYIFLIVDLETNVDTEVYKTARALRIVRFTKILSLLRLLR 1371

  Fly   404 INRL------WE-----WFDRTETATGYPNAFRICKVVLAILVLIHWNACMYFAISYEIGFSSDS 457
            ::||      ||     .:|......      ||..::..:|:|.||:.|:.|.:.....|..|.
 Frog  1372 LSRLIRYIHQWEEIFHMTYDLASAVV------RIFNLIGMMLLLCHWDGCLQFLVPMLQDFPEDC 1430

  Fly   458 WVYNLNGTRNNTLQRQYIYSFYWSTLTLTTIG-ETPTPENDVEYLFVVADFLAGVLIFATIVGNI 521
            || ::|...|.:..:||.::.:.:...:..|| ....||...:....:...:.|...:|..:|:.
 Frog  1431 WV-SINHMANESWGKQYSHAIFKAMSHMLCIGYGQQAPEGMTDVWLTMLSMIVGATCYAMFIGHA 1494

  Fly   522 GSMISNMNVARVEFQNRMDGVKQYMAFRRVGHELEARVIRWFAYTWSQSGALDEERVLAALPDKL 586
            .::|.:::.:|.::|.:...|:|||:|.::..:...|:..::.:.: |....|||.:|..|.:.|
 Frog  1495 TALIQSLDSSRRQYQEKYKQVEQYMSFHKLPPDTRQRIHEYYEHRY-QGKMFDEENILGELSEPL 1558

  Fly   587 KAEIAIQVHMDTLKQVRIFHDTEPGLLEALVLKLKLQVFSPGDYICRKGDVGKEMYIVKRGKLSV 651
            |.||......:.:..:.:|.:.:|..:.|::.||:.:||.|||||.|:|.|||:||.::.|.:|:
 Frog  1559 KEEIVNFNCRNLVANMPLFANADPNFVTAMLTKLRFEVFQPGDYIIREGTVGKKMYFIQHGVVSI 1623

  Fly   652 VGDDGITVLATLGA-------GSVFGEVSVLEIAGNRTGNRRTANVRSLGYSDLFCLAKRDLWET 709
            :         |.|:       ||.|||:.:|      |..||||:||:..|..|:.|:..:..|.
 Frog  1624 L---------TRGSKETKLSDGSYFGEICLL------TRGRRTASVRADTYCRLYSLSVDNFNEV 1673

  Fly   710 LSDYPEAR-----------STLTQRGCQLLRK-----DGLLDEQIFADSQRV--HD 747
            |.:||..|           ..:.::...||||     .|.::.:|.   |::  ||
 Frog  1674 LEEYPMMRRAFETVAMDRLDRIGKKNSILLRKRAENSSGSVNNEII---QQIVKHD 1726

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CngANP_001188960.1 Ion_trans 309..529 CDD:278921 55/244 (23%)
Ion_trans_2 <477..527 CDD:285168 8/50 (16%)
Crp 598..>722 CDD:223736 44/141 (31%)
CAP_ED 604..717 CDD:237999 43/119 (36%)
CLZ 720..791 CDD:293134 9/35 (26%)
hcn4XP_002944030.2 Plasmodium_HRP <67..248 CDD:253181
Ion_trans_N 1197..1239 CDD:285597 7/47 (15%)
Ion_trans 1259..1506 CDD:278921 56/257 (22%)
Crp 1570..>1708 CDD:223736 48/152 (32%)
CAP_ED 1576..1684 CDD:237999 44/122 (36%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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