DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CngA and cngb3

DIOPT Version :9

Sequence 1:NP_001188960.1 Gene:CngA / 36806 FlyBaseID:FBgn0261612 Length:840 Species:Drosophila melanogaster
Sequence 2:XP_017950391.2 Gene:cngb3 / 100497119 XenbaseID:XB-GENE-6035542 Length:784 Species:Xenopus tropicalis


Alignment Length:813 Identity:207/813 - (25%)
Similarity:366/813 - (45%) Gaps:167/813 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    97 AATSIPMAVDGEVHHLHYPRRSWQRKY----RQGIHRQPGGGAEQDEDEEEDDDDV--------- 148
            |...:|:.:......:|..|:...:::    |:|:..|   |::::|..|....|:         
 Frog    54 AVFRVPLVISAMKGIVHAKRKLNLKRHFQMSREGLQAQ---GSKRNEYAEAQLQDLFKRMRERTS 115

  Fly   149 ---DEDDDDEFGASVCEDNPEEAIAR----ADHDTQQKQHYQPNASDSSYVENGRKLIQEPSK-- 204
               |:..|.:.  |..|.:|.....:    .......|:..:|.|.|....|   |..:|..|  
 Frog   116 HYKDKLADPDI--SSAEPSPTATPVKPKPAPPPPPPPKKEEKPEAKDEKQAE---KQAEEAEKEH 175

  Fly   205 -------RSKPSALRRTLQALRQRLTKRNRPKPPDWFLEKFSNTTNTDKIGKGCPAMEDAALSSE 262
                   :.|...|:::||                    ||.           .|:..||.    
 Frog   176 YCDMLCCKFKRPTLKKSLQ--------------------KFK-----------LPSSIDAY---- 205

  Fly   263 IRGSSVLCNRLSVDPTLQSHYRWLAIVSLAVLYNIIFVVGRAVFWEINKSAPAFWYTLDYLCDFI 327
                           |..|:..||..|:::..:|...:..|.||.....:...:|...||:||.:
 Frog   206 ---------------TDHSYLLWLFFVAVSFNWNCWLIPMRCVFPVQTPNNILYWMISDYICDAL 255

  Fly   328 YLLDTLVHMHE-GFLDQGLLVRDAFRLRRHYFHTKGWYLDVLSMLPTDLAYIWWPPETCSSLYLP 391
            ||:|..:.... .|:..|.::.:..:.:.:|:.:..:.|||.|::|.||.|:.:.       :.|
 Frog   256 YLIDIFIFQPRLQFVKGGDIITERKQTKANYWESTKFRLDVASVIPFDLLYMVFG-------FQP 313

  Fly   392 CPVIVRLNRLLRINRLWEWFDRTETATGYPNAFRICKVVLAILVLIHWNACMYF-AISYEIGFSS 455
               :.|.||||:....:|:.||.|........:|:.:....:|.::|.|||:|: |.||| |.:|
 Frog   314 ---VFRANRLLKYTSFFEFNDRLEAVMEKAYIYRVIRTTGYLLFILHINACIYYWASSYE-GIAS 374

  Fly   456 DSWVYNLNGTRNNTLQRQYIYSFYWSTLTLTTIGETPTPENDVEYLFVVADFLAGVLIFATIVGN 520
            ..|||:..|       ..|:..:|::..||.|||....|:...|.:|.:.::..||.:|::::|.
 Frog   375 TKWVYDGKG-------NMYLRCYYFAVRTLITIGGLAEPQTVFEIVFQLLNYFTGVFVFSSLIGQ 432

  Fly   521 IGSMISNMNVARVEFQNRMDGVKQYMAFRRVGHELEARVIRWFAYTWSQSGALDEERVLAALPDK 585
            :..:|......:..::..:|....||:..::...::.||..|:.|||...|.|||..:|..:|.|
 Frog   433 MRDVIGAATAGQSYYRASVDKTVSYMSSNKIPKVVQNRVRTWYEYTWDSQGMLDESELLEEMPTK 497

  Fly   586 LKAEIAIQVHMDTLKQVRIFHDTEPGLLEALVLKLKLQVFSPGDYICRKGDVGKEMYIVKRGKLS 650
            ::..|||.|:...:.:|.:|...:..:::.|:|:||..|:.|||::|:||::|:||||:|:|.:.
 Frog   498 MQLAIAIDVNFAIVDRVDLFKGCDSQMIQDLLLRLKSIVYLPGDFVCKKGEIGREMYIIKQGAVQ 562

  Fly   651 VV-GDDGITVLATLGAGSVFGEVSVLEIAGNRTGNRRTANVRSLGYSDLFCLAKRDLWETLSDYP 714
            |: |.|...||.||.||:||||:|:|...|   ||||||||.:.|:::||.|.|:.|.|.|..||
 Frog   563 VLGGPDNQKVLVTLKAGAVFGEISLLSAGG---GNRRTANVVAYGFANLFILDKKSLNEILVHYP 624

  Fly   715 EARSTLTQRGCQLLRKDG------------------------LLDEQIFADSQRVHDSIEGGIEK 755
            :::..||::..:||::.|                        |....:.|.|.|...|:   :.:
 Frog   625 DSKKLLTKKAKKLLKEKGKPAGPAVVNKGFGHLIPPKPETPRLFKALMSATSGRTGLSL---LTR 686

  Fly   756 LELSVENLNMRLARL--LAEYTASQAKIKQRL----AKL-----EMNGG----PG---------- 795
            |:.:..|.|..:.:.  :|:.|...||.|::.    |||     |...|    ||          
 Frog   687 LKQATSNENKEVNKTSDMAKSTDDPAKQKEKSNVQDAKLTEESKEQPAGARATPGAAPKPDATAG 751

  Fly   796 ----TWRLECEPQSRARSGRLYSLQPKRRPRSR 824
                ::.:...|.::|..|.|.:::.:.|.:::
 Frog   752 SKSKSFIISMSPSAKAGEGELLTVEVRDRKKTK 784

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CngANP_001188960.1 Ion_trans 309..529 CDD:278921 61/221 (28%)
Ion_trans_2 <477..527 CDD:285168 14/49 (29%)
Crp 598..>722 CDD:223736 55/124 (44%)
CAP_ED 604..717 CDD:237999 53/113 (47%)
CLZ 720..791 CDD:293134 22/105 (21%)
cngb3XP_017950391.2 PLN03192 207..>589 CDD:215625 123/399 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1073751at2759
OrthoFinder 1 1.000 - - FOG0000167
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.920

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