DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CngA and cnga2

DIOPT Version :9

Sequence 1:NP_001188960.1 Gene:CngA / 36806 FlyBaseID:FBgn0261612 Length:840 Species:Drosophila melanogaster
Sequence 2:XP_004916824.1 Gene:cnga2 / 100494874 XenbaseID:XB-GENE-992758 Length:675 Species:Xenopus tropicalis


Alignment Length:669 Identity:317/669 - (47%)
Similarity:424/669 - (63%) Gaps:53/669 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   159 SVCEDNPEE---AIARADHDTQQKQHYQPNASDSSYVENGRKLIQEPSKRSKPSALRRTLQALRQ 220
            |||:|...|   .|::.:.|.         .|.||:  .||..:         |.:.|.:..||.
 Frog    43 SVCDDTSSELQRVISQDNGDV---------VSHSSF--RGRGAL---------SRIVRFVVVLRD 87

  Fly   221 --RLTKRNRPKPPDWFLEKF--SNTTNTDKIGKGCPAMEDAALSSEIRGSSVLCNRLSVDPTLQS 281
              ..:.|::.:.||.||::|  ......||........:|.....:.:....:|....|||:.:.
 Frog    88 WAHRSLRDQDQRPDSFLDRFRGPEVQANDKQPAKDEKEQDKVEQDKKKNDRKVCELFVVDPSGKW 152

  Fly   282 HYRWLAIVSLAVLYNIIFVVGRAVFWEINKSAPAFWYTLDYLCDFIYLLDTLVHMHEGFLDQGLL 346
            :||||.:::|.||||...:|.||.|.::..|..|.|:||||:||.||:.|.::....|||:||||
 Frog   153 YYRWLLVITLPVLYNWFLLVVRACFDDLQTSYVALWFTLDYICDVIYIADIVIRFRTGFLEQGLL 217

  Fly   347 VRDAFRLRRHYFHTKGWYLDVLSMLPTDLAYIWWPPETCSSLYLPCPVIVRLNRLLRINRLWEWF 411
            |||...|..:|..|..:.||::|:|||||.|.      ...::.|   .:|.||||...|::|.|
 Frog   218 VRDPKTLSNNYIRTLQFKLDIISILPTDLGYF------AVGIHRP---ELRFNRLLHFPRMFECF 273

  Fly   412 DRTETATGYPNAFRICKVVLAILVLIHWNACMYFAISYEIGFSSDSWVY-NLNGTRNNTLQRQYI 475
            |:|||.|.|||.|||..:||.||::||||.|:|:|.|..|||.:||||| ||...::..|.|:|:
 Frog   274 DQTETRTSYPNIFRIFNLVLYILLIIHWNGCIYYAFSKAIGFGADSWVYPNLTDPKHGYLAREYV 338

  Fly   476 YSFYWSTLTLTTIGETPTPENDVEYLFVVADFLAGVLIFATIVGNIGSMISNMNVARVEFQNRMD 540
            |..|||||||||||:||.|..|.|||||:.|||.|||||||||||:||||||||..|.|||:::|
 Frog   339 YCLYWSTLTLTTIGDTPQPMTDTEYLFVIFDFLVGVLIFATIVGNVGSMISNMNATRTEFQSKID 403

  Fly   541 GVKQYMAFRRVGHELEARVIRWFAYTWSQSGALDEERVLAALPDKLKAEIAIQVHMDTLKQVRIF 605
            .:|.||.||||..:|||:||.||.|.|:....:||..||..|||||:|||||.||:||||:||||
 Frog   404 AIKHYMQFRRVSKDLEAKVILWFDYLWTNKKTVDEREVLKNLPDKLRAEIAINVHLDTLKKVRIF 468

  Fly   606 HDTEPGLLEALVLKLKLQVFSPGDYICRKGDVGKEMYIVKRGKLSVVGDDGITVLATLGAGSVFG 670
            .:.|.|||..|||||:.||||||||||||||:|:||||:|.|||:|||:||||..|.|.:||.||
 Frog   469 QNCEAGLLVELVLKLRPQVFSPGDYICRKGDIGREMYIIKEGKLAVVGEDGITHYAVLTSGSCFG 533

  Fly   671 EVSVLEIAGNRTGNRRTANVRSLGYSDLFCLAKRDLWETLSDYPEARSTLTQRGCQLLRKDGLLD 735
            |:|:|.|.|::.||||||::||:||||||||:|.||.|.|.:||:|:..|.:||.::|.|:||||
 Frog   534 EISILNIEGSKMGNRRTASIRSIGYSDLFCLSKDDLMEALVEYPDAKKILEERGREILIKEGLLD 598

  Fly   736 EQIFADSQRVHDSIEGGIEKLELSVENLNM---RLARLLAEYTASQAKIKQRLAKLEM-----NG 792
            |    ..:::....:...|:|||...||::   |.||||.||:.:|..:|||:..||:     :|
 Frog   599 E----TKEKISVKGKSSEERLELVESNLDILHTRFARLLREYSNAQQTLKQRVTLLELKLRDIHG 659

  Fly   793 GPGTWRLECEPQSRARSGR 811
            |    .:..:.|..|..|:
 Frog   660 G----EVSSDGQESADEGK 674

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CngANP_001188960.1 Ion_trans 309..529 CDD:278921 120/220 (55%)
Ion_trans_2 <477..527 CDD:285168 38/49 (78%)
Crp 598..>722 CDD:223736 82/123 (67%)
CAP_ED 604..717 CDD:237999 75/112 (67%)
CLZ 720..791 CDD:293134 29/78 (37%)
cnga2XP_004916824.1 Ion_trans 153..395 CDD:366146 135/250 (54%)
Radical_SAM 428..>481 CDD:388499 31/52 (60%)
CAP_ED 467..583 CDD:237999 76/115 (66%)
CLZ 583..651 CDD:374604 27/71 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 282 1.000 Domainoid score I1626
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 604 1.000 Inparanoid score I922
OMA 1 1.010 - - QHG48384
OrthoDB 1 1.010 - - D1073751at2759
OrthoFinder 1 1.000 - - FOG0000167
OrthoInspector 1 1.000 - - otm48813
Panther 1 1.100 - - LDO PTHR45638
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X511
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1010.080

Return to query results.
Submit another query.