DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CngA and kcnh8

DIOPT Version :9

Sequence 1:NP_001188960.1 Gene:CngA / 36806 FlyBaseID:FBgn0261612 Length:840 Species:Drosophila melanogaster
Sequence 2:XP_031760363.1 Gene:kcnh8 / 100490406 XenbaseID:XB-GENE-981673 Length:1114 Species:Xenopus tropicalis


Alignment Length:762 Identity:175/762 - (22%)
Similarity:324/762 - (42%) Gaps:173/762 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   170 ARADHDTQQKQHYQPNASDSSYVENGRKLIQEPSKRSKPSALRRTLQALRQRLTKRNRPKPPDWF 234
            |:.:.:.::::..:......|:.:..:       :||     |..|..:...:.:|.:.|     
 Frog   138 AKIEKEDKKEERLKGRGKAGSHFDAAK-------RRS-----RAVLYHISGHIQRREKNK----- 185

  Fly   235 LEKFSNTTNTDKIGKGCPAMEDAALSSEIRGSSVLCNRLSVDPTLQSHYRWLAI-----VSLAVL 294
             ...:|....||     ||:.:..:....:...::.:    ..|.::.:.||.:     |::.|.
 Frog   186 -LNLNNNVFVDK-----PALPEYKVQDAKKSKFIILH----FSTFKAAWDWLILLATFYVAVTVP 240

  Fly   295 YNIIFVVGRAVFWEINKSAPAFWYTL--DYLCDFIYLLDTLVHMHEGFL-DQGLLVRDAFRLRRH 356
            ||:.|        |.|....:...|.  |...:.:::.|.:::....:: :.|.::..:..:..|
 Frog   241 YNVSF--------EDNDDPSSTRSTTVSDISVEILFITDIILNFRTTYVSESGQVIFKSRSICIH 297

  Fly   357 YFHTKGWY-LDVLSMLPTDLAYIWWPPETCSSLYLPCPVIVRLNRLLRINRLWEWFDR-TETATG 419
            |..|  |: :|:::.||.||.|.:  ..|..:| :....:::..||||:.||.:..|| ::.:| 
 Frog   298 YVTT--WFVIDLIAALPFDLLYAF--NVTVDNL-VSLVHLLKTIRLLRLLRLLQKLDRYSQHST- 356

  Fly   420 YPNAFRICKVVLAIL-----VLIHWNACMYFAI----------SYEIGFSSDSWVYNLNGTR--- 466
                     :||.:|     :|.||.||:::.|          |::||     |::.| |.|   
 Frog   357 ---------IVLTLLMSMFALLAHWMACIWYVIGKMEMKNKPLSWDIG-----WLHEL-GKRLES 406

  Fly   467 ---------NNTLQRQYIYSFYWSTLTLTTIGETPTPEN-DVEYLFVVADFLAGVLIFATIVGNI 521
                     ..|::..||.|.|::..:||::|......| |||.:|.:...|.|.|:.|.:.||:
 Frog   407 PFHSNDSQGGPTIRSTYIASLYFTLSSLTSVGFGNVSANTDVEKIFSICIMLIGALMHALVFGNV 471

  Fly   522 GSMISNMNVARVEFQNRMDGVKQYMAFRRVGHELEARVIRWFAYTWSQSGALDEERVLAALPDKL 586
            .::|..|......:..|...:|.::....:..:|:.|::.:|...||.:..:|...:|...||:|
 Frog   472 TAIIQRMYSRWSLYHTRTKDLKDFIRVHHLPQQLKQRMLEYFQTNWSVNNGIDSHELLKDFPDEL 536

  Fly   587 KAEIAIQVHMDTLKQVRIFHDTEPGLLEALVLKLKLQVFSPGDYICRKGDVGKEMYIVKRGKLSV 651
            :::|.:.::.:.| |:.:|.....|.|.:|.|.:|....:||:|:.|:||..:.:|:|..|.:.|
 Frog   537 RSDITMYLNKEIL-QLSLFESASRGCLRSLSLHIKTSFCAPGEYLLRQGDALQAIYLVCSGSMEV 600

  Fly   652 VGDDGITVLATLGAGSVFG-EVSVLE--IAGNRTGNRRTANVRSLGYSDLFCLAKRDLWETLSDY 713
            : .||: |||.||.|.:.| .:|:.:  |..|       |:|::|.|.||.|:..:.|:|.|..|
 Frog   601 L-KDGM-VLAILGKGDLIGANLSIKDQVIKTN-------ADVKALTYCDLQCIILKGLYEVLDFY 656

  Fly   714 PE------------------------------ARSTLTQRGCQLLRKDGLLDEQIFADSQRVHDS 748
            ||                              .:|||:|..   ||.:|.::.::   |..|.|.
 Frog   657 PEYAHTFVEHIQQDLTYNLREGHESDRMSRLSCKSTLSQTD---LRGNGSINNRL---SSIVEDE 715

  Fly   749 IEGGIEKLELSVENLNMRLARLLAEYTASQAKIKQRLAK----LEMNGGPGT------------- 796
            .|...|....|..:::.|       .|||:.| |...:.    :.:...|||             
 Frog   716 DEDTEEDEPSSPSSIHTR-------NTASKYK-KSATSNSSLGINLKSFPGTVPFKSPLRTCNPS 772

  Fly   797 ---WRLECEP--QSRARSGRLYSLQPKRRPRSRPDATAKSSDAAKQN 838
               .|.|.||  .||.|...|....|.......||.:.:..|..:.:
 Frog   773 STMARQENEPNLNSRKRENNLMLNLPTVTSLGPPDLSPRVVDGIEDH 819

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CngANP_001188960.1 Ion_trans 309..529 CDD:278921 62/252 (25%)
Ion_trans_2 <477..527 CDD:285168 17/50 (34%)
Crp 598..>722 CDD:223736 46/156 (29%)
CAP_ED 604..717 CDD:237999 41/145 (28%)
CLZ 720..791 CDD:293134 17/74 (23%)
kcnh8XP_031760363.1 PAS_9 40..135 CDD:404329
PLN03192 200..>617 CDD:215625 111/452 (25%)
PRK11753 580..>658 CDD:236969 30/86 (35%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.