DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CngA and kcnh7

DIOPT Version :9

Sequence 1:NP_001188960.1 Gene:CngA / 36806 FlyBaseID:FBgn0261612 Length:840 Species:Drosophila melanogaster
Sequence 2:XP_031749023.1 Gene:kcnh7 / 100486080 XenbaseID:XB-GENE-853944 Length:1205 Species:Xenopus tropicalis


Alignment Length:802 Identity:192/802 - (23%)
Similarity:339/802 - (42%) Gaps:147/802 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   105 VDGEVHHLHYPRRSWQRKYRQGIHRQPGGGAEQDEDEEEDDDDVDEDDDDEFGASVCEDNPEEAI 169
            |.|.:.| ..|:|.|.:.:...:|    .|:.......:|              |||      ::
 Frog   231 VTGPLDH-SSPKRQWDQLFPDRLH----AGSHISHARSKD--------------SVC------SM 270

  Fly   170 ARAD--HDTQ-----QKQHYQP-NASDSSYVENGRK-------LIQEPSKRSKPSALRRTLQALR 219
            .||.  ||.:     .|..::. :||:    :|||.       :...|....|.|.|..|..:..
 Frog   271 RRASSVHDIEGFSIHPKSVFRDRHASE----DNGRDFKVSHSWMTGGPFNHIKSSLLGSTSDSNL 331

  Fly   220 QRLTKRNRPKPPDWFLEKFSNTTNTDKIGKGCPAMEDAALSSEIR----------------GSSV 268
            .:.:..|  |.|...| .||:..| :|.....|:.|...::.:::                |:.|
 Frog   332 NKYSTIN--KIPQLTL-NFSDVKN-EKKASSPPSSEKTIIAPKVKERTHNVTEKVTQVLSLGADV 392

  Fly   269 LCNRLSVDPTLQS----HYR-----WLAIVSLAVLYNIIFVVGRAVFW----EINKSAPAFW--- 317
            |.......|.:..    ||.     |..::.|.|:|..||....|.|.    |..|.....:   
 Frog   393 LPEYKLQTPRINKFTILHYSPFKAVWDWLILLLVIYTAIFTPYSAAFLLNDREEQKRRECGYSCN 457

  Fly   318 --YTLDYLCDFIYLLDTLVHMHEGFLDQG-LLVRDAFRLRRHYFHTKGWYL-DVLSMLPTDLAYI 378
              ..:|.:.|.::::|.|::....:::|. .:|.|..::..|||  |||:| |:::.:|.||...
 Frog   458 PLNVVDLMVDIMFIIDILINFRTTYVNQNEEVVSDPAKIAIHYF--KGWFLIDMVAAIPFDLLIF 520

  Fly   379 WWPPETCSSLYLPCPVIVRLNRLLRINRLWEWFDRTETATGYPNAFRICKVVLAILVLI-HWNAC 442
            ....:..::|.    .:::..||||:.|:....||   .:.|..|  :..:::.|..|| ||.||
 Frog   521 GSGSDETTTLI----GLLKTARLLRLVRVARKLDR---YSEYGAA--VLMLLMCIFALIAHWLAC 576

  Fly   443 MYFAIS-----YEIGFSSDSWV----------YNLNGTRNN-TLQRQYIYSFYWSTLTLTTIG-E 490
            :::||.     |.|  ...||:          ||.:...:. :::.:|:.:.|::..:||::| .
 Frog   577 IWYAIGNVERPYLI--HKISWLDALGDQIKKPYNYSDPSSGPSIKDKYVTALYFTFSSLTSVGFG 639

  Fly   491 TPTPENDVEYLFVVADFLAGVLIFATIVGNIGSMISNMNVARVEFQNRMDGVKQYMAFRRVGHEL 555
            ..:|..:.|.:|.:...|.|.|::|:|.||:.::|..:......:..:|..||:::.|.::.:.|
 Frog   640 NVSPNTNSEKVFSICVMLIGSLMYASIFGNVSAIIQRLYSGTARYHMQMLRVKEFIRFHQIPNPL 704

  Fly   556 EARVIRWFAYTWSQSGALDEERVLAALPDKLKAEIAIQVHMDTLKQVRIFHDTEPGLLEALVLKL 620
            ..|:..:|.:.||.:..:|...||...|:.|:|:|.:.::...|:..:.|.....|.|.||.:|.
 Frog   705 RQRLEEYFQHAWSYTNGIDMNMVLKGFPECLQADICLHLNKTLLQNCKAFSGASKGCLRALAMKF 769

  Fly   621 KLQVFSPGDYICRKGDVGKEMYIVKRGKLSVVGDDGITVLATLGAGSVFGEVSVLEIAGNRTGNR 685
            |.....|||.:...||:...:|.:.||.:.::.||  .|:|.||...:|||:..|.....::   
 Frog   770 KTTHAPPGDTLVHSGDILTALYFLSRGSIEILKDD--IVVAILGKNDIFGEMVHLYAKPGKS--- 829

  Fly   686 RTANVRSLGYSDLFCLAKRDLWETLSDYPE-ARSTLTQRGCQLLRKDGLLDEQIFADSQRVHDSI 749
             .|:||:|.|.||..:.:.||.|.|..||| :...||    .|.....|.||...|...|.|..|
 Frog   830 -IADVRALTYCDLHKIQREDLLEVLDMYPEFSDQFLT----NLELTFNLRDENSKAALLRSHADI 889

  Fly   750 EGGIEKLELSVENLNMRLARLLAEYTASQAKIKQRLAKLEMNGGPGTWRLECEPQSRARSGRLYS 814
                   :.:.||..:|..:|     :.:.|..:..::.|...|         .:|.....|.||
 Frog   890 -------DFNGENCKLRRRKL-----SFKNKSDEDCSRDESQNG---------SESSTDDTRNYS 933

  Fly   815 LQPKRRPRSRPDATAKSSDAAK 836
            ...|.....:..:::.|.:..|
 Frog   934 STKKNMDIKKSGSSSSSINETK 955

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CngANP_001188960.1 Ion_trans 309..529 CDD:278921 60/244 (25%)
Ion_trans_2 <477..527 CDD:285168 15/50 (30%)
Crp 598..>722 CDD:223736 41/124 (33%)
CAP_ED 604..717 CDD:237999 39/113 (35%)
CLZ 720..791 CDD:293134 16/70 (23%)
kcnh7XP_031749023.1 PAS_9 29..134 CDD:404329
Ion_trans 417..679 CDD:395416 69/274 (25%)
CAP_ED 753..864 CDD:237999 39/116 (34%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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