DRSC/TRiP Functional Genomics Resources

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Protein Alignment CngA and kcnh5b

DIOPT Version :10

Sequence 1:NP_001188960.1 Gene:CngA / 36806 FlyBaseID:FBgn0261612 Length:840 Species:Drosophila melanogaster
Sequence 2:XP_002664253.1 Gene:kcnh5b / 100331767 ZFINID:ZDB-GENE-090319-1 Length:1005 Species:Danio rerio


Alignment Length:719 Identity:174/719 - (24%)
Similarity:296/719 - (41%) Gaps:157/719 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   194 NGRKLIQE--PSKRS-----KPSALRRTLQALRQRLT--KRNRPKPPDWFLEKFSNTTNTDKIGK 249
            |.:..||:  |..|:     |||.|...||.....|.  |:..||.|...:..:           
Zfish   158 NSKSTIQQITPVSRTDVTSHKPSRLAEVLQLGSDILPQYKQEAPKTPPHIILHY----------- 211

  Fly   250 GCPAMEDAALSSEIRGSSVLCNRLSVDPTLQSHYRWLAIV-----SLAVLYNIIFVVGRAVFWEI 309
                                |       |.::.:.|:.::     ::.|.||:.|.         
Zfish   212 --------------------C-------TFKTTWDWVILILTFYTAIMVPYNVSFK--------- 240

  Fly   310 NKSAPAFWYTLDYLCDFIYLLDTLVHMHEGFLDQ-GLLVRDAFRLRRHYFHTKGWY-LDVLSMLP 372
            .|.....|..||.:.|.|:|:|.:::.|..|:.. |.::.|...:|.:|..|  |: :|:||.||
Zfish   241 TKQNNVTWLVLDSVVDVIFLVDIVLNFHTTFVGPGGEVISDPNLIRMNYLKT--WFVIDLLSCLP 303

  Fly   373 TDLAYIWW-PPETCSSLYLPCPVIVRLNRLLRINRLWEWFDRTETATGYPNAFRICKVVLAILVL 436
            .|:...:. ..|..|||:....|:    ||||:.|:....|         :.......||.:||.
Zfish   304 YDIINAFENVDEGISSLFSSLKVV----RLLRLGRVARKLD---------HYLEYGAAVLVLLVC 355

  Fly   437 I-----HWNACMYFAI-SYEI------GFSSDSWV------------YNLNGT-------RNNTL 470
            :     ||.||::::| .||:      ...:|||:            ||.:||       ..::|
Zfish   356 VFGLVAHWLACIWYSIGDYEVIDEQTNTIKTDSWLFQLATSIGSPYRYNASGTGQWEGGPGKDSL 420

  Fly   471 QRQYIYSFYWSTLTLTTIG-ETPTPENDVEYLFVVADFLAGVLIFATIVGNIGSMISNMNVARVE 534
               ||.|.|::..:||||| ....|..|.|.:|.||..:.|.|::|||.||:.::...|......
Zfish   421 ---YITSLYFTMTSLTTIGFGNIAPTTDGEKIFSVAMMMVGSLLYATIFGNVTTIFQQMYANTNR 482

  Fly   535 FQNRMDGVKQYMAFRRVGHELEARVIRWFAYTWSQSGALDEERVLAALPDKLKAEIAIQVHMDTL 599
            :...::.|:.::...:|...|..||:.:...|||.|..:|.|:||:..|..::|:|.:.::....
Zfish   483 YHEMLNNVRDFLKLYQVPKGLSERVMDYIVSTWSMSKGIDTEKVLSICPKDMRADICVHLNRKVF 547

  Fly   600 KQVRIFHDTEPGLLEALVLKLKLQVFSPGDYICRKGDVGKEMYIVKRGKLSVVGDDGITVLATLG 664
            .:...|.....|.|.:|.::.::...:|||.|...|:....:..|..|.|.|:.||  .|:|.||
Zfish   548 NEHPAFRLASDGCLRSLAVEFQMIHSAPGDLIFHAGESVDLLCFVVSGSLEVIQDD--EVIAILG 610

  Fly   665 AGSVFGEVSVLEIAGNRTGNRRTANVRSLGYSDLFCLAKRDLWETLSDYPEARSTLTQR---GCQ 726
            .|.|||:|...|    .|.....||||:|.|.||..:.:..|.:.|..|....::.::.   .|.
Zfish   611 KGDVFGDVFWKE----TTLAHSCANVRALTYCDLHIIKREALLKVLDFYTAFANSFSRNLFLTCN 671

  Fly   727 LLRK-------DGLLDEQIFADSQRVHDSIEGGIEKLELSVENLNMRLARLLAEYTASQAKIKQR 784
            |.::       |...:|:   :.||..:.:     .|.:.|::    ..|.|.:....|.:::.:
Zfish   672 LRKRFVFRKIIDVKKEEE---ERQRSKNEV-----PLTIPVDH----PVRKLFQKFKQQKELRNQ 724

  Fly   785 LAKLEMNGGPGTWRLE-----CEPQSRARSGRLYSLQ----------PKRRPRSRPDATAKSSDA 834
            .|..:::.......|:     .:|.:......|:::|          .:..|.....|..|..|:
Zfish   725 GASAQLDLEKNQHHLQQPARMSKPHTSLMQNSLHAVQNGSTSSVVTISQITPIQNCLAYPKPGDS 789

  Fly   835 AKQN 838
            .|||
Zfish   790 IKQN 793

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CngANP_001188960.1 Ion_trans 282..529 CDD:459842 79/286 (28%)
CAP_ED 604..717 CDD:237999 37/112 (33%)
CLZ 720..790 CDD:465160 12/79 (15%)
kcnh5bXP_002664253.1 PAS_9 39..132 CDD:463873
PLN03192 218..>618 CDD:215625 119/428 (28%)
Blue background indicates that the domain is not in the aligned region.

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