DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment krimp and RNF17

DIOPT Version :9

Sequence 1:NP_611103.2 Gene:krimp / 36804 FlyBaseID:FBgn0034098 Length:746 Species:Drosophila melanogaster
Sequence 2:XP_011533454.1 Gene:RNF17 / 56163 HGNCID:10060 Length:1699 Species:Homo sapiens


Alignment Length:890 Identity:165/890 - (18%)
Similarity:307/890 - (34%) Gaps:263/890 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MNLEDISMIMKL--FDSNMHKLQGNLRSY---QTEMHQ----IHKELT----------------- 39
            ::|.|..:.|:|  |.|.      :|||:   .|.:|.    :.||:|                 
Human   664 VSLRDALVFMELAKFKSQ------SLRSHFEKNTTLHYHPPILPKEMTDVSVTVCHINSPGDFYL 722

  Fly    40 EKLSHADLL---------YRS--------LIPLHDHLVASLSEVNAHVMKLNVQLHINRQSVRLG 87
            :.:...|:|         |:|        |.|:.|         .|.|.|....:....:.:.|.
Human   723 QLIEGLDILFLLKTIEEFYKSEDGENLEILCPVQD---------QACVAKFEDGIWYRAKVIELN 778

  Fly    88 DYEYYEKS-IDNPYSSIRSGLQ--AIEKP---GCAEAICQSSKPAFVEC----LPSSTSEEVPVV 142
            .:|...|| ||      |:..|  .|:||   .....:|.|.....|:.    ||.....||..|
Human   779 HWESCWKSCID------RTKQQKLIIQKPVNSSLMLTVCLSHAILIVKVQIKGLPGHQEVEVKYV 837

  Fly   143 AVQEASSTNQLDAISVVNENLSEERDATPQPLAVSKNMEETM-----PSNPFHEQLEG-----SL 197
            .....:.....|...:.:|.|:....|....||..:..:.||     ....|.|:.:.     |:
Human   838 DFGNTAKITIKDVRKIKDEFLNAPEKAIKCKLAYIEPYKRTMQWSKEAKEKFEEKAQDKFMTCSV 902

  Fly   198 EEIPVGSKIVVETEKANNPVRSEASAP---ATSDNQSLLAAKQGTQTIGTG-ICNKISKSTINMP 258
            .:|...:.::||       :.....||   .||.|..|:  |:|..:...| |....|:..|.: 
Human   903 IKILEDNVLLVE-------LFDSLGAPEMTTTSINDQLV--KEGLASYEIGYILKDNSQKHIEV- 957

  Fly   259 NNWQLENPTEVTAASIEKVNKL-PKS-PRNRFLLPPKGGTETTRRDIYNQ--------ILKDMAA 313
              |. .:|.|:.:..:..:|.: .|| |...|            :.:||:        ::.....
Human   958 --WD-PSPEEIISNEVHNLNPVSAKSLPNENF------------QSLYNKELPVHICNVISPEKI 1007

  Fly   314 FPENTIVTAVLASVDVTDNCAYV-AKWDESSDRIKKVLQRQLPLQELDQLPDYGDIFAVLDSINN 377
            :.:..:...:|.|::.....||. :||:..  :.:..:...:.:|:.:|......|..|.|::..
Human  1008 YVQWLLTENLLNSLEEKMIAAYENSKWEPV--KWENDMHCAVKIQDKNQWRRGQIIRMVTDTLVE 1070

  Fly   378 IITRITINSSSAGGGYDAYLIDFGEHIHFDGNETIFKLPDDIKRLPAQAIRCDLIN--------- 433
            ::                 |.|.|..:..: .:.:.||.:::|.:...::.|.|::         
Human  1071 VL-----------------LYDVGVELVVN-VDCLRKLEENLKTMGRLSLECSLVDIRPAGGSDK 1117

  Fly   434 -----CDIANMH---CFVNTYIKIRVHENNNSTLVAEPVIDRLSRPTKTNTTKYPAGITEDDMAM 490
                 ||..:::   ......:::...|||.:..:...:..|..:..:.:.:||   :.:..:|:
Human  1118 WTATACDCLSLYLTGAVATIILQVDSEENNTTWPLPVKIFCRDEKGERVDVSKY---LIKKGLAL 1179

  Fly   491 ----LNEIDESTSDPLKAVLGFRPKDEQRICRHYDPKLNGCFKGNNCRFAHEPFAPNGATKDVEL 551
                :|.:|.|.|...|::  ..|.:::      |..:..|.|.|        |.|:..|.|:..
Human  1180 RERRINNLDNSHSLSEKSL--EVPLEQE------DSVVTNCIKTN--------FDPDKKTADIIS 1228

  Fly   552 ARALPE----------------------TIFDTTVHFEIGSIVG----ILIT-------FINGPT 583
            .:.:.|                      .:|:.||     |.||    |.:.       .|....
Human  1229 EQKVSEFQEKILEPRTTRGYKPPAIPNMNVFEATV-----SCVGDDGTIFVVPKLSEFELIKMTN 1288

  Fly   584 EVYGQF--LDGSPPLVWDKKDVPENKRTFKSKPRLLDIVLALYSDGCFYRAQIIDEFPSEYMIFY 646
            |:....  |....|..|.|.:.                .....||..:||.::::.......:.|
Human  1289 EIQSNLKCLGLLEPYFWKKGEA----------------CAVRGSDTLWYRGKVMEVVGGAVRVQY 1337

  Fly   647 VDYGNTEFVPLSCLAPCENVDSFKPHRVFSFHIEGIVRSKNLTHQKTIECIEYLKSKLLNTEMNV 711
            :|:|.||.:|...|.|....... |.......:.......|:.....||.::.|.||   .::::
Human  1338 LDHGFTEKIPQCHLYPILLYPDI-PQFCIPCQLHNTTPVGNVWQPDAIEVLQQLLSK---RQVDI 1398

  Fly   712 HLVQRLP-------------DGF-LIRFLDDWKYI----PEQLLQ 738
            |::: ||             ||. |..|:..:||.    .|::|:
Human  1399 HIME-LPKNPWEKLSIHLYFDGMSLSYFMAYYKYCTSEHTEEMLK 1442

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
krimpNP_611103.2 TUDOR 568..679 CDD:278965 23/123 (19%)
TUDOR 618..662 CDD:119391 11/43 (26%)
RNF17XP_011533454.1 TUDOR 446..>553 CDD:278965
TUDOR 702..870 CDD:278965 36/182 (20%)
TUDOR 758..852 CDD:119391 23/99 (23%)
TUDOR 990..1106 CDD:278965 20/135 (15%)
TUDOR 1043..1089 CDD:119391 8/63 (13%)
TUDOR 1253..1371 CDD:278965 26/139 (19%)
TUDOR 1308..1353 CDD:119391 11/60 (18%)
TUDOR 1486..1626 CDD:278965
TUDOR 1560..1607 CDD:119391
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1525
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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