DRSC/TRiP Functional Genomics Resources

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Protein Alignment krimp and tdrd5

DIOPT Version :10

Sequence 1:NP_611103.2 Gene:krimp / 36804 FlyBaseID:FBgn0034098 Length:746 Species:Drosophila melanogaster
Sequence 2:NP_001038315.1 Gene:tdrd5 / 557999 ZFINID:ZDB-GENE-050208-502 Length:905 Species:Danio rerio


Alignment Length:692 Identity:129/692 - (18%)
Similarity:226/692 - (32%) Gaps:219/692 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   154 DAISVVNENLSEERDATPQP------------------LAVSKNMEETMPSNPFH--EQLEGSLE 198
            |....:.|.:|::||..|:|                  ..:.....:..|:.|.|  .||:..|.
Zfish    81 DTTKGIEELVSKQRDHKPKPNNRKGKPGYFNISYPRLQPVILPRRGQAKPALPAHLRSQLKQLLS 145

  Fly   199 EIPV-----GSKIVVETEKANNPVR------SEASAPATSDNQSLLAAKQGTQTIGTGICNKISK 252
            ..||     .|:.|.:..|..|..:      ||..: |..|...:..::.|:|.        :.:
Zfish   146 HGPVRLSELESRYVAQFGKPLNVTQYGFFSISEMLS-AAMDFIIMQQSRTGSQL--------LLR 201

  Fly   253 STINMPNNWQLENPTEVTAASIEKVNKLPKSPRNRFL-LPPKGGTETTRRDIYNQILKDMAAFPE 316
            |.:. |.| |.||       .:.:.:....||:.|.. ..||..:...||             ||
Zfish   202 SAVT-PQN-QPEN-------LMRRFSMQSTSPKQRLAGFSPKASSLPERR-------------PE 244

  Fly   317 NTIVTAVLASVDVTDNCAYVAKWDESSDRIKKVLQRQLPLQELDQLPDYGDIFAVLDSINNIITR 381
               |:...:||...:.......::|:..::::.|::|:    |::    |....|...:...:.:
Zfish   245 ---VSLDPSSVSKPEPVKEEQSFEETVFKLEEELRQQI----LEK----GTAGTVSQELKEKLRK 298

  Fly   382 ITINSSSAGGGYDAYLIDFGEHIHFDGNETIFKLPDDIKRLPAQAI---RCDLINCDIANMHCFV 443
            :...:   |.|.                 :|..||.:.:|:..:.:   :|..::          
Zfish   299 VVAEN---GNGI-----------------SIHNLPTEYQRMHGEELPVSQCGFLS---------- 333

  Fly   444 NTYIKIRVHENNNSTLVAEPVIDRLSRPTKTNTTKYPAGITEDDMAMLNEIDESTSDPLKAVLGF 508
                            |.|.|                 |...|.:|:....|||.|..:  |:.|
Zfish   334 ----------------VTEMV-----------------GALSDTLAIQRGTDESESHWM--VVEF 363

  Fly   509 RPKDEQRICRHYDPKLN----------GCFKGNNCR----------FAHEPFAP--NGATKDVEL 551
            :|.|.|. |   :|:|:          |..:..:.|          :.||...|  :....|.||
Zfish   364 KPIDTQP-C---EPELSPGDGTTSSPTGELQNPSSRAFYFSCPESAWEHEETEPLTDSQESDAEL 424

  Fly   552 ARA----------LPETIFDTT----------------VHFEIGSIVGILITFINGPTEVYGQFL 590
            ..|          .||.:....                ||.:...::.:|:.....|:..|.:|.
Zfish   425 RVANKTIHQMVNLFPELMVSRVSAVPLDAVRCQKLKPPVHRKERELLPVLVEQTESPSYFYIRFS 489

  Fly   591 DGSPPLV-----------WDKKDVPENKRTFKSKPRLLDIVLALYSDGCFYRAQIIDEF-PSEYM 643
            .......           :...||.|..|...:..|...:......|..|||..|.:.| .:|..
Zfish   490 QNKEARALENMMIEMRSCYSYPDVAERYRLPDAYVRPGQVCCVAPRDMWFYRVVIHEVFSETEVK 554

  Fly   644 IFYVDYGNTEFVPLSCLAPCENVDSFKPHRVFSFHIEGIVRSKNLTHQKTIECIEYL--KSKLLN 706
            ::|||||:...|....|...:...:..|.:.....:.|:....|:.....:.|.:.|  :..|: 
Zfish   555 VYYVDYGDITKVERHSLRFLKACYADLPAQAVPAMLAGVRPITNIWPASAVSCFQRLCCERTLV- 618

  Fly   707 TEMNVHLVQRLPDGFLIRFLDDWK-----YIPEQLLQRNYAQ 743
              ..||..|   :.||:.||.|..     |:...|:|..:||
Zfish   619 --AGVHSYQ---EDFLLLFLCDTNTEEDVYVHLALIQEGHAQ 655

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
krimpNP_611103.2 TUDOR 576..679 CDD:425754 23/114 (20%)
Tudor_dTUD-like 618..663 CDD:410450 14/45 (31%)
tdrd5NP_001038315.1 LOTUS_1_TDRD5 3..97 CDD:193599 5/15 (33%)
LOTUS_2_TDRD5 133..202 CDD:193589 17/77 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 219..264 12/60 (20%)
LOTUS_3_TDRD5 289..364 CDD:193590 18/139 (13%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 368..393 5/28 (18%)
Tudor_TDRD5 474..590 CDD:410490 24/115 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 694..728
Blue background indicates that the domain is not in the aligned region.

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