DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment krimp and vret

DIOPT Version :9

Sequence 1:NP_611103.2 Gene:krimp / 36804 FlyBaseID:FBgn0034098 Length:746 Species:Drosophila melanogaster
Sequence 2:NP_651092.1 Gene:vret / 42695 FlyBaseID:FBgn0263143 Length:691 Species:Drosophila melanogaster


Alignment Length:725 Identity:130/725 - (17%)
Similarity:233/725 - (32%) Gaps:253/725 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    89 YEYYEKSIDNPYSSIRSGLQAIEKPGCAEAICQSSKPAFVECL-------------PSSTSEEVP 140
            :.|:|.     .:|:.:..|.:::           .|..::|:             |.:::|.:|
  Fly    97 FVYFEN-----IASLETAQQRVQR-----------YPNLIKCITGRPQKEREITSDPVTSTEPMP 145

  Fly   141 V--VAVQEASST----NQLDAISVVNENLSE-------ERD--------ATPQPLA--------- 175
            .  .|:.....|    |:...||...:|..|       .:|        ||..|:.         
  Fly   146 TPGPAISATERTPVNHNREVPISTGGQNHPEFFRPPLVTKDDYKRGSLLATNDPIQRYLNVKYEF 210

  Fly   176 ------VSKNMEET-MPSNPFHEQLEGSLEEIPVGSKIVVETEKANNPVRSEASAPATSD----- 228
                  :.|..:|| :|....|.:   |...||:.:..|.|.:|..:.:....|......     
  Fly   211 ALERHDIYKLKDETRIPQVVLHFR---SGRTIPLSTVAVTEEDKTKSLLEDGVSKCVVCQNWTDT 272

  Fly   229 ----------NQSLLA--AKQGTQTIGTGICNKISKSTINMPNNWQLENPTEVTAASIEKV-NKL 280
                      |.|..|  |:|..|..|.|       ..:|:.                ||| .|.
  Fly   273 FCKLCKMPFCNASCFADVAEQHKQACGKG-------EILNLD----------------EKVGRKY 314

  Fly   281 PKSPRNRFLLPPKGGTETTRRDIYNQILKDMAAFPENTIVTAVLASVDVTDNCAYVAKWDESSDR 345
            ||..     |||.|....            :.||.:..:|  .:.|.|:..:.||...       
  Fly   315 PKPG-----LPPSGSKVR------------ITAFEQTNVV--YVRSADIQIDIAYYTV------- 353

  Fly   346 IKKVLQRQLPLQELDQLPDYGDIFAVLDSINNIITR-ITINSSSAGGGYDAYLIDFGEHIHFDGN 409
            :.:|:.......:|...|..|.|  ||......::| :.:|..:....|..: ||||. :.....
  Fly   354 LTEVMMLGKDASKLQSTPVCGQI--VLYKFEGHMSRAMVLNVDNIKEIYVVF-IDFGS-VEVTQL 414

  Fly   410 ETIFKLPDDIKRLPAQAIRCDLINCDIANMHCFVNTYIKIRVHENNNSTLVAEPVIDRLSRPTKT 474
            |.:::....:..|....:...|....    ..||...|:..::|.:.|.:..   |...||...|
  Fly   415 ERLYECSSYLAGLTCYPVAVKLRGVP----RRFVGPNIREVMYELDQSLVFN---IKYSSREYDT 472

  Fly   475 NTTKYPAGITEDDM---------AMLNEIDESTSDPLKAVLGFRPKDEQRICRHYDPKLNGCFKG 530
            :.......:||.|:         .:|..::.|.||     ||::                     
  Fly   473 SKGMQVVVMTEIDINRSLNRLFKTILTPVEPSVSD-----LGYK--------------------- 511

  Fly   531 NNCRFAHEPFAPNGATKDVELARALPETIFDTTVHFEIGSIVGILITFINGPTEVYGQFLDGSPP 595
            .:|.    |:.|....|::.:      .:.|.|.         |...||      |...:|.:..
  Fly   512 EDCL----PYIPLHCGKNINV------VVMDNTF---------IQCGFI------YCTSIDLAYE 551

  Fly   596 LVWDKKDVPE-NKRTFKS---KPRLLDIVLALYSDGCFYRAQII----DEFPSEYMIFYVDYGNT 652
            :...::|:.| .::..|.   .|.:.::.:|.| :|.:.|...:    |.:||   |.::|||| 
  Fly   552 VTKMQRDIQEYGEKIAKCATYAPPINELCIAKY-EGKWRRGLSVELVGDGYPS---ILFIDYGN- 611

  Fly   653 EFVPLSCLAPCENVDSFKPHRVFSFHIEGIVRSKNLTHQKTIECIEYLKSKLLNTEMNVHLVQRL 717
             .||    ....::..:.|..:|                           .::.|::::..|...
  Fly   612 -IVP----THVTDIRPYPPQFIF---------------------------PIMTTQLDLIGVPEK 644

  Fly   718 PDGFLIRFLD 727
            |....|::||
  Fly   645 PTDEQIKWLD 654

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
krimpNP_611103.2 TUDOR 568..679 CDD:278965 25/118 (21%)
TUDOR 618..662 CDD:119391 14/47 (30%)
vretNP_651092.1 TUDOR 320..438 CDD:278965 27/142 (19%)
TUDOR 374..419 CDD:119391 12/48 (25%)
TUDOR 520..640 CDD:278965 29/177 (16%)
TUDOR 577..622 CDD:119391 14/54 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1525
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR22948
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.000

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