DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment krimp and qin

DIOPT Version :9

Sequence 1:NP_611103.2 Gene:krimp / 36804 FlyBaseID:FBgn0034098 Length:746 Species:Drosophila melanogaster
Sequence 2:NP_650735.3 Gene:qin / 42236 FlyBaseID:FBgn0263974 Length:1857 Species:Drosophila melanogaster


Alignment Length:808 Identity:163/808 - (20%)
Similarity:271/808 - (33%) Gaps:226/808 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 YQTEMHQIHKELTEKLSHADLLYRSLIPLH----DHLVASLSEVN-AHVMKLNVQLHINRQSVRL 86
            |..:.::.|.::...:.|:....|.||.::    ..:..:|:.:| ||:..||.:..:.|...:|
  Fly   219 YCMKCYRSHCQICSTVHHSGHRIRKLIEINQSYASEIPTTLNSLNMAHIHVLNGKQVVQRAKQKL 283

  Fly    87 GDYEYYE-KSIDNPYSSIRSGLQAIEKPGCAEAICQSSKPAFVECLPSSTSEEVPVVAVQEASST 150
            .||.... .||...:|.:...||..|.. ..|.:.:||.|              |.:.:.||  .
  Fly   284 NDYATETLASISKRFSHLHGLLQVAELQ-VIEKLRESSLP--------------PQLKLNEA--M 331

  Fly   151 NQLDAISVVNENLSEE-RDATPQPLAVSKNMEETMPSNPFHEQLEGSLEEIPVGSKIVVETEKAN 214
            .||.....|.|.|::. .......:||.:::..........|.    ||:||.    .|:..|.:
  Fly   332 GQLSGYETVIERLTKSLNSGVGNDMAVPRDVSLRWLLKLICEH----LEKIPT----TVQVSKVD 388

  Fly   215 -NPVRSEASAPATSDNQSLLAAKQGTQTIGTGICNK----ISKSTINMPNNWQLENPTEVTAASI 274
             ||.|...|  ...|..::...:.....|  .:|.|    ||:|..:.|..    ..|.:|::|.
  Fly   389 ENPYRVTCS--RFMDISNIFKCEFVNPNI--QVCFKTDLEISRSLSSSPKG----EITFLTSSSS 445

  Fly   275 EKVNKLPKSPRNRFLL----------------PPKGGTETTRRDIYNQILKDMAA----FPENTI 319
            .|.|   ..|.:|.||                ..|.|...|  ::....|...||    ||...:
  Fly   446 SKEN---FDPHSRKLLLAQNSKLKKATQVSQSQKKRGKNAT--EVAQSSLNSTAAIIDEFPAKDL 505

  Fly   320 -VTAVLASVDVTDNCAYVAKWDESSDRIK-----KVLQRQLP-------LQELDQLPDYGDIFA- 370
             .....:|:|:|......   ::|||..|     :|...|.|       :....:|.:..|.|| 
  Fly   506 DFLHNFSSLDITKRNKTT---EDSSDWFKTDTLVRVRSVQSPEDFYVQGIHAAQRLREELDTFAH 567

  Fly   371 VLDSINNIITRITINSS--------------------SAGGGYDAYLIDFGEHIHFDGNETIFK- 414
            .|...:::...|.:..:                    :....|:.:|.|.|.|:|...::  |: 
  Fly   568 TLSDSSSVPPTIVVGQNYIIHHKDKDRYYRALVSQKLTNENLYNVFLTDIGVHLHVRCSD--FRV 630

  Fly   415 LPDDIKRLPAQAIRCDLINCDIAN----MHCFVNTYIKIRVHENNNSTLVAEPVIDRLSRPTKTN 475
            :|:.|..||..|:.|.|......|    .....:.::| ::.:||               |.:..
  Fly   631 VPERISHLPYSAVHCSLSELMPKNGESEWDSKASAFLK-QIVQNN---------------PVRVI 679

  Fly   476 TTKYPAGITEDDMAMLNEIDESTSDPLKAVLGFRPKDEQRICRHYDPKLNGCFKGNNCRFAHE-- 538
            ..|   .:|.:    |:.:|..||                   :||..::.......|..|..  
  Fly   680 VKK---ALTYE----LHGVDLITS-------------------NYDTNISVRDSFLYCGLAISRD 718

  Fly   539 ------PFAPNGATKDVELARALPETIFDTTVHFEIGSIVGILITFINGPTEVYGQFLDGSPPLV 597
                  |.||.        |..||.      :.|..|.:..:.:..:..|.|.|....|.....:
  Fly   719 GAPLWLPPAPT--------ALRLPR------ISFRFGDVYMVQMLHVEDPQEFYVMRHDYEKKRL 769

  Fly   598 W---------DKKDVPENKRTFKSKPRLLDIVLALYSDGCFYRAQIIDEFPSEYMIFY-VDYG-- 650
            |         |:.::.:.:..|..:   |.:...|.|.|.:.||.|....|..|::.: ||.|  
  Fly   770 WLQFSLQEAMDRINISQLQNIFLGQ---LHLGCVLQSGGQWKRASIEQILPDGYVLVHLVDEGPS 831

  Fly   651 ----------------NTEFVPLSCLAPCENVDSFKPHRVFSFHIEGIVRSKNLT-----HQKTI 694
                            :|......|||..|.    :....:::..||....|.||     :...|
  Fly   832 QKVFWDQLFVLPQKFWDTGLAIKCCLADVET----RAEHSYTWTPEGTTLFKQLTSNPRLYMDVI 892

  Fly   695 ECIEYL--------KSKLLNTEMNVHLV 714
            .|.|.|        :|....|.:.|.||
  Fly   893 SCTEDLVYVSLHFERSNSETTSVGVQLV 920

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
krimpNP_611103.2 TUDOR 568..679 CDD:278965 25/138 (18%)
TUDOR 618..662 CDD:119391 14/62 (23%)
qinNP_650735.3 zf-RING_5 25..75 CDD:291308
BBOX 139..174 CDD:197662
TUDOR 536..648 CDD:278965 22/113 (19%)
TUDOR 741..859 CDD:278965 23/120 (19%)
TUDOR <805..839 CDD:119391 9/33 (27%)
TUDOR 981..1107 CDD:278965
TUDOR 1296..1403 CDD:278965
TUDOR 1337..1385 CDD:119391
TUDOR 1710..1761 CDD:119391
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1525
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR22948
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.000

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