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Protein Alignment krimp and rnf17

DIOPT Version :9

Sequence 1:	NP_611103.2	Gene:	krimp / 36804	FlyBaseID:	FBgn0034098	Length:	746	Species:	Drosophila melanogaster
Sequence 2:	XP_021334643.1	Gene:	rnf17 / 334519	ZFINID:	ZDB-GENE-030131-6451	Length:	1521	Species:	Danio rerio

Alignment Length:	1051	Identity:	185/1051 - (17%)
Similarity:	341/1051 - (32%)	Gaps:	375/1051 - (35%)

- Green bases have known domain annotations that are detailed below.

  Fly     2 NLEDI--SMIMKLFDSNMHKLQGNLRSYQTEMHQIHKE-----LTE--KLSHADLLYRSLIPLHD 57
            :|:||  :.::|.:.|...:...|:...:|...|:..|     |.:  |.|.|||...|::.|.:
Zfish   533 SLKDIIPADLVKGWSSEASEEMRNVLRNETAEMQVFGEDGDALLVDLKKTSMADLKKNSMVSLRE 597

  Fly    58 HLV--------------------------ASLS-EVNAHVMKLNVQLHINRQSVRLGDYEYYEKS 95
            |||                          .||: ||||.|.      |:|..|      ::|.:.
Zfish   598 HLVFMELARFYCPVITTGSAPLLFYPSVQPSLNVEVNAMVS------HVNTPS------DFYVQL 650

  Fly    96 IDN-PYSSIRSGLQAIEKPGCAEAICQSSKPAFVECLPSSTSEEVPVVAVQEASSTNQLD----- 154
            ::| .|..:.|.||.......:...||...|:..:...:...:|...|.|........::
Zfish   651 VENTEYPLLHSKLQDCYNQPKSNNECQVYCPSLSQACVAFHDQEWSRVQVTGFPGGRMVEVRFVD 715

  Fly   155 -----AISVVN-ENLSEERDATPQPLAVSKNMEETMPS---------NPFHEQLEGSLEEIPVGS 204
                 .:||.: .::.:|....|: :|:..|:.:.:.|         ..|.|.:||
Zfish   716 FGYKRTLSVKDLRHIKDEFFVLPE-MALWCNLNDVISSQETWANEACESFKELVEG--------- 770

  Fly   205 KIVVETEKANNPVRSEASAPATSDNQSLLAAKQGTQTI--GTGICNKISKSTINMP---NNWQLE 264
            |::....|.|.|............:.....|..|.:.:  |..:.||.::.....|   .:|  :
Zfish   771 KLMTVVAKKNVPSSKPVPVCLFEISDDCTGASIGDELVKKGYAVYNKDTQVRDAQPLETTSW--D 833

  Fly   265 NPTEVTAASIEKVNKLPKSPRNRFLLPPKGGTETTRRDI-YNQILKDMAAFPENTIVTAVLASVD 328
            .|.|..|..:              ::.|...:|..:..: ....|||:     ...||.|.:..:
Zfish   834 PPFEEEALPV--------------VMTPSSASEELKPSLSLPSCLKDI-----RVRVTHVTSPGN 879

  Fly   329 VTDNCAYVAKWDESSDRIKKVLQRQLPLQELDQLPDYGDIFAVLDSINN--IITRITINSSSAGG 391
            :   |..:.::|....||...|:......|..::....:::.   ::||  :..|..:.|.|..|
Zfish   880 I---CVQLLQFDNQLKRIHDTLKNLFSKSEPQEMQWEAEMYC---AVNNTGVWERGQVCSVSTCG 938

  Fly   392 GYDAYLIDFGEHIHFDGNETIFKLPDDIKRLPAQAIRCDLINCDIANMH------------C-FV 443
            ..:....|||        .|:....|:::.|....|...|:.|:::.:.            | |:
Zfish   939 VAEVLRCDFG--------NTVKLHVDNLRPLHPDLIGSFLLECNLSGVRPAGGRSTWTATACDFI 995

  Fly   444 NTYI-----------------------------------------------KIRVHENNNSTLVA 461
            :.|:                                               |..:..:..|.||.
Zfish   996 SHYLTGAMALMAIKEPSTRPVLVSLFCSNRAGQNVSFADFLISEGLALKERKAEMVFSEESVLVT 1060

  Fly   462 E--PVID----------RLS-RPTKTNTTKYPA-----------------------GITEDDMAM 490
            |  |||.          |:: .|.:..|..||.                       .:|...:..
Zfish  1061 EPQPVISPTQTPPTPSRRINPPPERVKTHSYPPPELPPCGHILMSISAVSEQGVIYAMTHQAVCE 1125

  Fly   491 LNEIDESTSDPLK----------------AVLG-----FRPKDEQ-------------------R 515
            .:.:.|.....:|                ||:|     :|.:.::                   .
Zfish  1126 FDRLRERLQQHIKTLPRQKNYNWKGVLGCAVMGTDMFWYRGQVQEVIGGHVKVRYVDQGLVESIP 1190

  Fly   516 ICRHYD-------PKL------NGCF--------------------KGNNCRFAHEPFAPNGATK 547
            :|..|.       |:|      ||..                    :..|.:....|..|.|..
Zfish  1191 VCHVYPMVLCEDVPQLCVPCQINGVLPIGKGWQWDAVVLMKELLLGRSVNVQIMEHPKDPCGCV- 1254

  Fly   548 DVEL---ARALPETI-------FDTTVHFEIGSIVGILITFINGPTEVYGQFLDGSPPL--VWDK 600
            .||:   ..||.:.:       ||..:..:...:|...:..:: ..::..:.|:..||:  |:.:
Zfish  1255 TVEIMVDGMALSKIMVHHQYATFDPAISSQEDYVVKPPMPDLD-DWDLNTEGLEEQPPVLGVYKE 1318

  Fly   601 KDVPENKRTFKSKPR-----------LLD------------------------------------ 618
            ..:|:.::.|.:|.:           :||
Zfish  1319 LHIPKERKHFPAKVKHIRTPNEVFLCVLDKSLCKLEQDESMEETLEQVNENIENLSLLTDFPIEC 1383

  Fly   619 IVLALYSDGCFYRAQII---DEFPS-EYMIFYVDYGNTEFVPLSCLA---------PCENV---- 666
            :.||.||||.:|||:|:   :..|| :.::.:||:|:.:.:||..|.         ||..|
Zfish  1384 LCLAEYSDGKYYRAKILGFSEVTPSVKLLVRHVDFGSDDIIPLHKLRQLPASLHHFPCAAVYVKL 1448

  Fly   667 DSFKPHRVFSFHIEGIVRSKNLTHQKTIECIEYLKSKLLNTEMNVHLVQRLPDGFLIRFLDDWKY 731
            ..|||..| |..:|.|..|.:.|.:..:|.|:     |||.|:...:....|...::.:..|...
Zfish  1449 AGFKPTNV-SSDLERIPYSLDWTMKAMMEMID-----LLNGELTAVVTATKPQLTVLLYNADGTL 1507

  Fly   732 IPEQLLQRNYA 742
            :...|:::..|
Zfish  1508 VHTPLVEKGLA 1518

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.