DRSC/TRiP Functional Genomics Resources

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Protein Alignment krimp and Tdrd5

DIOPT Version :9

Sequence 1:NP_611103.2 Gene:krimp / 36804 FlyBaseID:FBgn0034098 Length:746 Species:Drosophila melanogaster
Sequence 2:NP_001128213.1 Gene:Tdrd5 / 214575 MGIID:2684949 Length:1040 Species:Mus musculus


Alignment Length:723 Identity:127/723 - (17%)
Similarity:238/723 - (32%) Gaps:285/723 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly   151 NQLDAISVVNENLSEERDATPQPLAVSKNMEETMP---------SNPFHEQLEGSLEE-IPVGSK 205
            :..:.::..::.:|.|:......|.:.|::.|...         :.||..:.:||... .||   
Mouse   169 SMFEVLNAASDVISVEQTRAGSLLTLKKSVSEDKQRGWPAGKVFTQPFRMKQQGSYSTGFPV--- 230

  Fly   206 IVVETEKANNPVRSEASAPATS---DNQSLLAAKQGTQTIGTGICNKISKSTINMPNNWQLENPT 267
                       :::..|.|.::   ..|.|..||       |...|.:..|.:|           
Mouse   231 -----------MKAHFSQPISNMEPPKQVLSMAK-------TPTFNSVEASRLN----------- 266

  Fly   268 EVTAASIEKVNKLPKSPRNRFLLPPKGGTETTRRDIYNQILKDMAAFPENTIVTAVLASVDVTDN 332
                 ..||:|:|..:.::.......||  |...::..:|...::.||:...::.:|...::|  
Mouse   267 -----HTEKLNQLESTFKSVIAQIGPGG--TVDPELKRKIQFVVSKFPQGLFISKLLGEFELT-- 322

  Fly   333 CAYVAKWDESSDRIKKVLQRQLPLQELDQLPDYGDIFAVLDSINNIITRITINSSSAGGGYDAYL 397
                             .:.||..::|..|    ::..::.::::|:.                 
Mouse   323 -----------------FKEQLSPKQLGFL----NVTELVGALSDILR----------------- 349

  Fly   398 IDFGEHIHFDGNETIFKLPDDIKRLPA----QAIRCDLINCDIANMHCFVNTYIKIRVHENNNST 458
            ::|.|.     .:.:.....|:|.||:    .::|                           ||.
Mouse   350 VEFSEE-----RQDLLVFDADLKPLPSGGPLSSVR---------------------------NSC 382

  Fly   459 LVAEPVIDRLSRPTKTNTTKYPAGITEDDMAMLNEIDESTSD-PLKAVLGFRPKDEQRICRHYD- 521
            || :|  |:     ||....:.:.::.:.::.: .:.::|.| |||.    :.:.||:|.:..: 
Mouse   383 LV-QP--DK-----KTEANPWTSSLSRNSLSTV-AVKKTTWDCPLKN----QKEPEQKIYKKPNL 434

  Fly   522 -------------PKLNGCFKGNNCRFAHEPFAPNGATKDVELARALPETIFDTTVHFEIGSIVG 573
                         |:|       :...|:....|: |.:..:|.|..|   .||:      ::||
Mouse   435 VVKPLQLQVETNKPQL-------SLSVANHDIPPD-AVRAKKLCRLPP---LDTS------TLVG 482

  Fly   574 ILITFINGPTEVY--------GQFLDG---------SPPLVWDKKDVPENKRTFKSKPRLLDIVL 621
            :.:.:|..|::.|        .:.|:.         |..||.|:..:||    :..:|..|..| 
Mouse   483 VFVEYIISPSQFYIRIYSRDSSELLEDMMIEMRRCYSNQLVSDRYIMPE----YFIQPGHLCCV- 542

  Fly   622 ALYSDGCFYRAQIIDEF--PSEYMIFYVDYGNTEFVPLSCL--------------APC------- 663
            .:..|..:||. ||...  ..|..:||.|:||...|..|.|              .||       
Mouse   543 KISEDKWWYRV-IIHRILGKKEVEVFYPDFGNIGTVQKSSLRFLKCCYTKLPAQAIPCSLAWVRP 606

  Fly   664 -------------ENVDSFKP-HRVFSFHIEGIVR------SKN---------LTHQKTIECIEY 699
                         :.:...|| ..|...:|:||:.      |.|         .|....|.|.|.
Mouse   607 AEEHWTARAILHFQKLCGLKPLVGVVDEYIDGILNIFLCDTSSNEDVYFHHVLRTEGHAIVCREN 671

  Fly   700 LKSK--------------------------------LLNTEMNV--HLVQRLPDGFLIRFLDDWK 730
            ..||                                .||.:..:  ...|.:.||..|.:|   |
Mouse   672 APSKGFRDFNPPALYTNASSAGDMVLTDLGHPAQQHYLNEDQEILQQAQQDINDGKCISYL---K 733

  Fly   731 YIPEQLLQ 738
            ..|::||:
Mouse   734 SAPKELLK 741

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
krimpNP_611103.2 TUDOR 568..679 CDD:278965 34/164 (21%)
TUDOR 618..662 CDD:119391 15/59 (25%)
Tdrd5NP_001128213.1 LOTUS_1_TDRD5 4..98 CDD:193599
LOTUS_2_TDRD5 127..196 CDD:193589 3/26 (12%)
LOTUS_3_TDRD5 292..365 CDD:193590 12/117 (10%)
TUDOR 483..602 CDD:278965 29/124 (23%)
TUDOR 537..583 CDD:119391 15/47 (32%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 857..891
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 912..975
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1525
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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