DRSC/TRiP Functional Genomics Resources

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Protein Alignment krimp and Tdrd5

DIOPT Version :10

Sequence 1:NP_611103.2 Gene:krimp / 36804 FlyBaseID:FBgn0034098 Length:746 Species:Drosophila melanogaster
Sequence 2:NP_001128213.1 Gene:Tdrd5 / 214575 MGIID:2684949 Length:1040 Species:Mus musculus


Alignment Length:723 Identity:127/723 - (17%)
Similarity:238/723 - (32%) Gaps:285/723 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly   151 NQLDAISVVNENLSEERDATPQPLAVSKNMEETMP---------SNPFHEQLEGSLEE-IPVGSK 205
            :..:.::..::.:|.|:......|.:.|::.|...         :.||..:.:||... .||   
Mouse   169 SMFEVLNAASDVISVEQTRAGSLLTLKKSVSEDKQRGWPAGKVFTQPFRMKQQGSYSTGFPV--- 230

  Fly   206 IVVETEKANNPVRSEASAPATS---DNQSLLAAKQGTQTIGTGICNKISKSTINMPNNWQLENPT 267
                       :::..|.|.::   ..|.|..||       |...|.:..|.:|           
Mouse   231 -----------MKAHFSQPISNMEPPKQVLSMAK-------TPTFNSVEASRLN----------- 266

  Fly   268 EVTAASIEKVNKLPKSPRNRFLLPPKGGTETTRRDIYNQILKDMAAFPENTIVTAVLASVDVTDN 332
                 ..||:|:|..:.::.......||  |...::..:|...::.||:...::.:|...::|  
Mouse   267 -----HTEKLNQLESTFKSVIAQIGPGG--TVDPELKRKIQFVVSKFPQGLFISKLLGEFELT-- 322

  Fly   333 CAYVAKWDESSDRIKKVLQRQLPLQELDQLPDYGDIFAVLDSINNIITRITINSSSAGGGYDAYL 397
                             .:.||..::|..|    ::..::.::::|:.                 
Mouse   323 -----------------FKEQLSPKQLGFL----NVTELVGALSDILR----------------- 349

  Fly   398 IDFGEHIHFDGNETIFKLPDDIKRLPA----QAIRCDLINCDIANMHCFVNTYIKIRVHENNNST 458
            ::|.|.     .:.:.....|:|.||:    .::|                           ||.
Mouse   350 VEFSEE-----RQDLLVFDADLKPLPSGGPLSSVR---------------------------NSC 382

  Fly   459 LVAEPVIDRLSRPTKTNTTKYPAGITEDDMAMLNEIDESTSD-PLKAVLGFRPKDEQRICRHYD- 521
            || :|  |:     ||....:.:.::.:.::.: .:.::|.| |||.    :.:.||:|.:..: 
Mouse   383 LV-QP--DK-----KTEANPWTSSLSRNSLSTV-AVKKTTWDCPLKN----QKEPEQKIYKKPNL 434

  Fly   522 -------------PKLNGCFKGNNCRFAHEPFAPNGATKDVELARALPETIFDTTVHFEIGSIVG 573
                         |:|       :...|:....|: |.:..:|.|..|   .||:      ::||
Mouse   435 VVKPLQLQVETNKPQL-------SLSVANHDIPPD-AVRAKKLCRLPP---LDTS------TLVG 482

  Fly   574 ILITFINGPTEVY--------GQFLDG---------SPPLVWDKKDVPENKRTFKSKPRLLDIVL 621
            :.:.:|..|::.|        .:.|:.         |..||.|:..:||    :..:|..|..| 
Mouse   483 VFVEYIISPSQFYIRIYSRDSSELLEDMMIEMRRCYSNQLVSDRYIMPE----YFIQPGHLCCV- 542

  Fly   622 ALYSDGCFYRAQIIDEF--PSEYMIFYVDYGNTEFVPLSCL--------------APC------- 663
            .:..|..:||. ||...  ..|..:||.|:||...|..|.|              .||       
Mouse   543 KISEDKWWYRV-IIHRILGKKEVEVFYPDFGNIGTVQKSSLRFLKCCYTKLPAQAIPCSLAWVRP 606

  Fly   664 -------------ENVDSFKP-HRVFSFHIEGIVR------SKN---------LTHQKTIECIEY 699
                         :.:...|| ..|...:|:||:.      |.|         .|....|.|.|.
Mouse   607 AEEHWTARAILHFQKLCGLKPLVGVVDEYIDGILNIFLCDTSSNEDVYFHHVLRTEGHAIVCREN 671

  Fly   700 LKSK--------------------------------LLNTEMNV--HLVQRLPDGFLIRFLDDWK 730
            ..||                                .||.:..:  ...|.:.||..|.:|   |
Mouse   672 APSKGFRDFNPPALYTNASSAGDMVLTDLGHPAQQHYLNEDQEILQQAQQDINDGKCISYL---K 733

  Fly   731 YIPEQLLQ 738
            ..|::||:
Mouse   734 SAPKELLK 741

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
krimpNP_611103.2 TUDOR 576..679 CDD:425754 32/156 (21%)
Tudor_dTUD-like 618..663 CDD:410450 15/60 (25%)
Tdrd5NP_001128213.1 LOTUS_1_TDRD5 4..98 CDD:193599
LOTUS_2_TDRD5 127..196 CDD:193589 3/26 (12%)
LOTUS_3_TDRD5 292..365 CDD:193590 12/117 (10%)
Tudor_TDRD5 484..601 CDD:410490 29/122 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 857..891
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 912..975
Blue background indicates that the domain is not in the aligned region.

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