DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment krimp and tag-250

DIOPT Version :9

Sequence 1:NP_611103.2 Gene:krimp / 36804 FlyBaseID:FBgn0034098 Length:746 Species:Drosophila melanogaster
Sequence 2:NP_001021188.2 Gene:tag-250 / 176113 WormBaseID:WBGene00016203 Length:626 Species:Caenorhabditis elegans


Alignment Length:628 Identity:122/628 - (19%)
Similarity:212/628 - (33%) Gaps:193/628 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   140 PVVAVQEASSTNQLDAI-----SVVNENLSEERDATPQPLAVSKNMEETMPSNPFHEQLEGSLEE 199
            |......:||...:.|:     |.:.:.::.:.|       ||:.|||.                
 Worm     4 PPDGTSSSSSAKFMSAVNGLVPSTIFDRINSDMD-------VSEEMEEI---------------- 45

  Fly   200 IPVGSKIVVETEKANNPVRSEASAPATSDNQSLLAAKQGTQTIGTGICNKISKSTINMPNNWQLE 264
                .:::.|..|.|.|:...|:.         |:.|...:.:..|:..:       :|.:|   
 Worm    46 ----REVLYEMIKTNFPMGVAATH---------LSEKYHEEFVSKGLGRE-------LPEDW--- 87

  Fly   265 NPTEVTAASIEKVNKLPKSPRNRFLLPPKGGTETTRRDIYNQILKDMAAFPENTIVTAVLASVDV 329
             ..:||||  |:.....:.|.. .|......|.:.:|.            |.|::...|::    
 Worm    88 -IQQVTAA--EEFEAQTRGPIT-ILFVRLSNTSSFKRP------------PINSVNVRVIS---- 132

  Fly   330 TDNCAYVAKWDESSDRIKKVLQRQ-------------------------------------LPLQ 357
            ||.       :.::|.:||:.||:                                     ..|.
 Worm   133 TDR-------EPTADELKKIKQRKENEPTEHAKTLSQQSVALKEGSTVSIVYADSPKRFFIRALA 190

  Fly   358 ELDQLPDYG----DIFAVLDSINNIITRITINSSSAGGGYDAYLIDFGEHIHFDGNETIFKLPDD 418
            :.||....|    :|:|.....:.:.:|:.|....|||.|...          |.|.|.|::   
 Worm   191 DDDQYEKIGTTLAEIYAQETPPSALDSRVAIYEIVAGGAYALQ----------DSNGTWFRV--- 242

  Fly   419 IKRLPAQA--IRCDLINCDIANMHCFVNTYIKI---RVH----------------ENNNSTLVAE 462
            |.:.|.|:  :.|..:  |:.....|....|::   .||                ....|..:..
 Worm   243 IAKQPPQSGQVMCHFV--DVGVCEKFPVAAIRLLPPAVHPVMSIGSMAREVRMDVSEEESLRLNN 305

  Fly   463 PVIDRLSRPTKTNTTKYPAGITEDDMAMLNEIDESTSDPLKAVLGFRPKDEQRICRHYDPKLNGC 527
            ..:| |:..||.:..:.|..:|      |::.|.|.|:.| .|:..:..|...| ..:..|.:|.
 Worm   306 KFVD-LTFETKDDGIQVPINLT------LSKFDSSDSESL-PVVDLQSSDGLSI-TEFLKKPSGV 361

  Fly   528 FKGNNCRFAHEPFAP-NGATKDVELARALPETIFDTTV------HFEIGSIVGILITFINGPTEV 585
            .:.:.......|..| :.:|..:......|.||...||      .|...:|      |..|||::
 Worm   362 VRLSTPTKTTSPITPASASTSSLTCLFDKPATIQPMTVAQMPMSAFPANAI------FAAGPTDI 420

  Fly   586 YGQ--FLDGSPPLVWDK-KD---VPENKRTFKSKPRLLDIVLALYSD-----GCFYRAQIIDEFP 639
            ..:  .||..|..::.| ||   :|:::  .:|.|.......|...|     .|. ||..||:  
 Worm   421 SLRQLSLDPMPDYMYAKLKDECALPDSQ--LESSPDFGGFYAAFIDDRWERVQCI-RASKIDK-- 480

  Fly   640 SEYMIFYVDYGNTEFVPLSCLAPCENVDSFKPHRVFSFHIEGI 682
            ..|.::.:|.|..::|....:....:...||...:|...|.||
 Worm   481 QAYCVYLLDVGAFQYVRKEAMRRLNSTSPFKKMLMFKCKIGGI 523

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
krimpNP_611103.2 TUDOR 568..679 CDD:278965 28/121 (23%)
TUDOR 618..662 CDD:119391 11/48 (23%)
tag-250NP_001021188.2 TUDOR 167..293 CDD:278965 25/140 (18%)
TUDOR 222..277 CDD:197660 15/69 (22%)
TUDOR 402..522 CDD:278965 30/130 (23%)
TUDOR 451..508 CDD:197660 13/59 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR22948
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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