DRSC/TRiP Functional Genomics Resources

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Protein Alignment krimp and tsn-1

DIOPT Version :9

Sequence 1:NP_611103.2 Gene:krimp / 36804 FlyBaseID:FBgn0034098 Length:746 Species:Drosophila melanogaster
Sequence 2:NP_494839.1 Gene:tsn-1 / 173811 WormBaseID:WBGene00006626 Length:914 Species:Caenorhabditis elegans


Alignment Length:544 Identity:103/544 - (18%)
Similarity:178/544 - (32%) Gaps:208/544 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   152 QLDAISVVNENLSEERDATPQPLAVSKNMEETMPSNPFHEQLEGSLEEIPVGSKIVVETEKANNP 216
            |:|.:...:||..|:..||.:  ...:|:.|.:.|...              ||:|  ..:|::.
 Worm   420 QIDYVQPKSENFPEKTCATIK--IGDQNIAEGLISRGL--------------SKVV--RHRADDE 466

  Fly   217 VRSEASAPATSDNQSLLAAKQGTQTIGTGICNKISKSTINMPNNWQLENPTEVTAASIEKVNKLP 281
            .||       |:..:||||:...:....|:   .:..|....:..:::   |:|....:....||
 Worm   467 NRS-------SEYDTLLAAEANAEKGKKGL---FADKTAEKKDTHRIQ---EITGDLAKAKQFLP 518

  Fly   282 KSPRN-------RFLLPPKGGTETTRRDIYNQILKDMAAFPENTI-VTAVLASVDVTDNCAYVAK 338
            ...|.       .||   .||   :|..||         .|:.|: :|.:|..:    ||...|:
 Worm   519 YLQRGGRAEGVVEFL---SGG---SRLRIY---------IPKETVLITFLLGGI----NCPKGAR 564

  Fly   339 --------------WDESSDRIKK-VLQRQLPLQELDQLPDYGDIFAVLDSINNIITRITINSSS 388
                          .||::...:| |||.::.|:                          :.|:.
 Worm   565 VGPGGVSTGAAEPFADEAAAFTRKLVLQHEVQLE--------------------------VESTD 603

  Fly   389 AGGGYDAYLIDFGEHIHFDGNETIFKLPDDIKRLPAQAIRCD--LINCDIANMHCFVNTYIKIRV 451
            ..|.:..||     ::..|||             .::||...  |:...:|::|      .....
 Worm   604 KNGNFVGYL-----YVSPDGN-------------TSRAINLSEALVENGLASLH------FTAER 644

  Fly   452 HENNNSTLVAEPVIDRLSRPTKTNTTKYPAGITEDDMAMLNEIDESTSDPLKAVLGFRPKDEQRI 516
            ..:.|:.|.||    ..::..|.|..   |..||:...  .|::...:|..:....||       
 Worm   645 SGHYNALLSAE----NKAKKAKKNIW---ANFTEEQHQ--EEVEVQQADTSERKQNFR------- 693

  Fly   517 CRHYDPKLNGCFKGNNCRFAHEPFAPNG---ATKDVELARALPETIFDTTVHFEIGSIVGILITF 578
                             :.|....||..   :.:::|                            
 Worm   694 -----------------QVAVTDIAPGALRFSAQNIE---------------------------- 713

  Fly   579 INGP-----TEVYGQFLDGSPPLVWDKKDVPENKRTFKSKPRLLDIVLALYS-DGCFYRAQIIDE 637
             :||     |....|.|...|||.          .::.:|..  |:.:|.:| ||.:||.::...
 Worm   714 -DGPKIEKMTTEMRQALAEHPPLA----------GSYTTKRG--DLCVAKFSQDGQWYRCKVESV 765

  Fly   638 FPSEYMIFYVDYGNTEFVPLSCLA 661
            ...:..|.|:||||.|.:....||
 Worm   766 RAGQAEIVYIDYGNRETIEAVKLA 789

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
krimpNP_611103.2 TUDOR 568..679 CDD:278965 25/100 (25%)
TUDOR 618..662 CDD:119391 16/45 (36%)
tsn-1NP_494839.1 SNc 22..168 CDD:214615
SNc 30..168 CDD:238102
SNc 193..328 CDD:214615
SNc 201..328 CDD:238102
SNc 341..492 CDD:214615 22/99 (22%)
SNc 350..492 CDD:238102 22/99 (22%)
SNc 524..668 CDD:214615 39/219 (18%)
SNc 536..668 CDD:238102 36/204 (18%)
TUDOR 687..808 CDD:278965 31/168 (18%)
TUDOR 744..788 CDD:119391 14/45 (31%)
SNc 758..904 CDD:214615 11/32 (34%)
SNc <850..906 CDD:294094
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1525
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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