DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment krimp and tdrkh

DIOPT Version :10

Sequence 1:NP_611103.2 Gene:krimp / 36804 FlyBaseID:FBgn0034098 Length:746 Species:Drosophila melanogaster
Sequence 2:XP_031747152.1 Gene:tdrkh / 100145497 XenbaseID:XB-GENE-5945653 Length:720 Species:Xenopus tropicalis


Alignment Length:715 Identity:143/715 - (20%)
Similarity:245/715 - (34%) Gaps:182/715 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 MKLFDSNMHKL---------------QGNLRS---YQTEMHQIHKELTEKLSHADLLYRSLIPLH 56
            :::.|..:::|               :||:|.   .||:.|...||:.:.....::..|..    
 Frog    58 LRVLDGEIYELCMKVPSDSVKLLVGKEGNIRKRVRKQTDAHIQVKEVPDSAGAQEVTLRGT---- 118

  Fly    57 DHLVASLSEVNAHVMKLNVQLHINRQ--SVRLGDYEYYEKSIDNPYSSIRSGLQAIEKPGCAEAI 119
            ...|....||...|::.:..|.:..|  |..:|             ..|..|.:.|      .||
 Frog   119 QKQVCHAQEVVNRVLQESAILRVELQLPSKCMG-------------RIIGQGGERI------RAI 164

  Fly   120 CQSSKPAFVECLPSSTSEEV-PVVAVQEASSTNQLDAISVVNENLSEERDATPQPLAVSKNMEET 183
            .::: .|.::|.|.:...:: |...:....:..|::|.....:.:|||..:..|..|        
 Frog   165 TRTT-GAKIDCQPRTNGTQMSPTRCITVTGTKEQVEAAKFHIQKVSEEEQSLQQRAA-------- 220

  Fly   184 MPSNPFHEQLEGSLEEIPVGSKIVVETEKANNPVRSEASAPATSDNQSLLAAKQGTQTIGTGICN 248
             .|:.|..:.:   |.|.|..|...|.....:.::.|              .:.|.:.||     
 Frog   221 -ESSAFRCRRK---ELISVKKKEAQEANSRGSGIQEE--------------KRGGAEPIG----- 262

  Fly   249 KISKSTINMPNNWQLENPTEVTAASIEKVNKLPK----SPRNRFLLPPKGGTETTRRDIYNQILK 309
                .:::..|....||.|:.|       .::|:    ||...|           |.|.|..:..
 Frog   263 ----ESLHRGNPPSKENVTDTT-------YEVPRFEVSSPEYPF-----------RADEYVDVYV 305

  Fly   310 DMAAFPENTIVTAVLASVDVTDNCAYVAKWDESSDRIKKVLQRQLPLQELDQLPDYGDIFAVLDS 374
            .....||:..: .:|.|.....:.......:...|:...|.:.|:           |||.|....
 Frog   306 SAVENPEHFWI-QILGSRSTQLDKLTSEMTEHYQDKKGGVAEIQV-----------GDIVAAPFR 358

  Fly   375 INNIITRITINSSSAGGGYDAYLIDFGEHIHFD-GNETIFKLPDDIKRLPAQAIRCDLINC---- 434
            .:....|..:......|..|.|.:|:|:  ::| |.|.:|.|..|...||.|||.|.|...    
 Frog   359 SDYFWYRAKVAGFLENGNVDLYYVDYGD--NWDVGREKLFPLRHDFLSLPFQAIECGLSKVSPNG 421

  Fly   435 ------------DIANMHCFVNTYIKIRVHENNNSTLVAEPVI--DRLSRPTKTNTTKYPAG--- 482
                        |:.  ||.:...:..::....:..:.:..|:  |..:.|......|..||   
 Frog   422 GAWTEEALLYFEDLT--HCALWKPLMAKISSFPSPGVSSFQVLLFDSCTDPVTDIRQKLIAGGFA 484

  Fly   483 -------ITEDD-----MAMLNEIDESTSDPLKAVLGFRPKDEQRICRHYDPKL--NGCFK---- 529
                   :.||:     ..:|:|:...:.:|........|:......|..||.|  :|..:    
 Frog   485 VERKESPLREDEEGSLVARLLDEVTSLSLEPETVSFSLEPETVSFSSRLDDPHLPSDGSIELMRA 549

  Fly   530 ----------GNNCRFAHEPFAPNGATKDVELARALPETIFDTTVHFEIGSI-VGILITFI-NGP 582
                      |:..:....|...:.|.::.|  .:|.::|...|:....||: .|...|.. ||.
 Frog   550 DPEPQAAPSLGHKPKVTSTPVCYSRAEEEQE--ESLEKSIAKITLGDSEGSLESGTTETASENGT 612

  Fly   583 TEVYGQFLDGSPPLVWDKKDVPENKRTFKSKPRLLDIVLALYSD-GCFYRAQIIDEFPSEYMIFY 646
            |...|...|.|..|.   ......:.:|.|.| |.|  .::||. ||||  .:.|| |:...|||
 Frog   613 TSYEGSSKDSSVDLT---GSFTSEEHSFSSSP-LED--SSIYSPRGCFY--YLTDE-PTSSSIFY 668

  Fly   647  646
             Frog   669  668

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
krimpNP_611103.2 TUDOR 576..679 CDD:425754 25/73 (34%)
Tudor_dTUD-like 618..663 CDD:410450 13/30 (43%)
tdrkhXP_031747152.1 KH_1 70..130 CDD:459630 12/63 (19%)
KH-I 138..220 CDD:469614 19/101 (19%)
Tudor_TDRD2 321..413 CDD:410483 25/104 (24%)

Return to query results.
Submit another query.