DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG15701 and Sdic3

DIOPT Version :10

Sequence 1:NP_611100.1 Gene:CG15701 / 36801 FlyBaseID:FBgn0034095 Length:1051 Species:Drosophila melanogaster
Sequence 2:NP_728323.3 Gene:Sdic3 / 318231 FlyBaseID:FBgn0052823 Length:533 Species:Drosophila melanogaster


Alignment Length:500 Identity:89/500 - (17%)
Similarity:159/500 - (31%) Gaps:176/500 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   415 SYGKLNASQVATQTQSPHMDGECQTLEVHSRSSWTQHPPHYGGQFVLSCSVDAELDETWSKQPAD 479
            |.|..|...:|...|.   |.|..:|:.......::.||.|     |:..:....|...:..|.:
  Fly    52 STGGGNGDVLAFDAQG---DDEESSLQNLGNGFTSKLPPGY-----LTHGLPTVKDVAPAITPLE 108

  Fly   480 -EYEASISRLEQLHRLEQARSQQLQQKRLAKSTDLERLNSFLHRAGRLMGLVLEGKTTAHGQGNS 543
             :.|..:.:  :::.|.:.:.|.:...        |....|:.||||::...|.           
  Fly   109 IKKETEVKK--EVNELSEEQKQMIILS--------ENFQRFVVRAGRVIERALS----------- 152

  Fly   544 PRNVPLQTGLLNA--------------LPVRRIF-------------------------GSAGNG 569
             .||.:.|..:..              |.:.|:|                         ||..|.
  Fly   153 -ENVDIYTDYIGGGDSEEANDERSHARLSLNRVFYDERWSKNRCITSMDWSTHFPELVVGSYHNN 216

  Fly   570 QLVVTVHECPADSNVYKEDFASLLMVWSLA-NPSQPLRLLSTWAEVSRVALSAQAQDIVVAGLRD 633
            :      |.|.:.:       .::|||:.. ..|.|..:....:.|.....:....::::.|...
  Fly   217 E------ESPNEPD-------GVVMVWNTKFKKSTPEDVFHCQSAVMSTCFAKFNPNLILGGTYS 268

  Fly   634 GSVAMWDLR----------------ETHS-YCSKL--------------DGHLTHF-----AATQ 662
            |.:.:||.|                .||. ||.::              ||.|..:     :..|
  Fly   269 GQIVLWDNRVQKRTPIQRTPLSAAAHTHPVYCLQMVGTQNAHNVISISSDGKLCSWSLDMLSQPQ 333

  Fly   663 SVVPMPEQQDK------------EVNAMDLGAVVDVRSFRSHLNAGGV--AATSGLQTTYKEVQY 713
            ..:.:.::|.|            |:|::.:|:           ..|.|  |:..||::...||..
  Fly   334 DTLELQQRQSKAIAITSMAFPANEINSLVMGS-----------EDGYVYSASRHGLRSGVNEVYE 387

  Fly   714 ASLNDSGLLTMWTLVEGASSTNSNEFSSPWARVKLLQSGSCDLRSYLERRLLKSHQSAYEKTKSL 778
            ..|   |.:|       ..||:.|:.|..:..:.|..|....::.:           :.:.||.|
  Fly   388 RHL---GPIT-------GISTHYNQLSPDFGHLFLTSSIDWTIKLW-----------SLKDTKPL 431

  Fly   779 FQGNIYSDDVLRELNDT------QTLTTALQGQGLQGLRFTSIDT 817
            :.....||.|:    |.      ..|..|:.|.|...|...:.||
  Fly   432 YSFEDNSDYVM----DVAWSPVHPALFAAVDGSGRLDLWNLNQDT 472

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15701NP_611100.1 PTZ00108 <23..270 CDD:240271
Sdic3NP_728323.3 Dynein_IC2 21..51 CDD:463291
WD40 196..512 CDD:475233 58/325 (18%)
WD40 repeat 196..245 CDD:293791 10/61 (16%)
WD40 repeat 251..289 CDD:293791 5/37 (14%)
WD40 repeat 298..337 CDD:293791 6/38 (16%)
WD40 repeat 349..435 CDD:293791 22/117 (19%)
WD40 repeat 441..479 CDD:293791 8/35 (23%)
WD40 repeat 487..513 CDD:293791
Blue background indicates that the domain is not in the aligned region.

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