DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ITGA9 and if

DIOPT Version :9

Sequence 1:NP_002198.2 Gene:ITGA9 / 3680 HGNCID:6145 Length:1035 Species:Homo sapiens
Sequence 2:NP_001162777.1 Gene:if / 32661 FlyBaseID:FBgn0001250 Length:1396 Species:Drosophila melanogaster


Alignment Length:912 Identity:257/912 - (28%)
Similarity:442/912 - (48%) Gaps:124/912 - (13%)


- Green bases have known domain annotations that are detailed below.


Human    18 LALVVAGIPAGAYNLDPQRPVHFQGPADSFFGYAVLEH-----FHDNTRWV--LVGAPKAD-SKY 74
            |.|::..:.|..||:|....|.|:..::|.||:::..|     |:.|...|  :|||||.| |:|
  Fly    20 LILLLIAMSAHGYNIDLPSYVRFRQSSNSMFGFSIAMHKGRSGFYGNQNNVSLIVGAPKFDTSRY 84

Human    75 SPSVKSPGAVFKCRVHTNPDRRCTELDMARGKNRGTSCGKTCREDRDDEWMGVSLARQPKADGRV 139
            ...|...|.||||.:: :.|.:....| ::|.||...  |...:.:..:|:|.::|....:| .|
  Fly    85 QQGVTEAGGVFKCSLN-DDDCKLVPFD-SKGNNRNVD--KEVVDRKSYQWLGATVATGRDSD-LV 144

Human   140 LACAHRWKNIYY-----EADHILPHGFCYIIPSNLQAKGRTLIPCYEEYKKKYG-EEHGSCQAGI 198
            :|||.|:  :::     .|..|.|.|.|:  .|:...:...:.||   ....:| ...||||||.
  Fly   145 VACAPRY--VFHTMTPSRAFRIDPVGTCF--TSHNFEEFYEVSPC---RTNNWGYHRQGSCQAGF 202

Human   199 AGFF--TEELVVMGAPGSFYWAG-TIKV--------------------------LNLTDNTYLKL 234
            :...  ....:.:|||||:||.| |..:                          :...:|.....
  Fly   203 SAAINGNGSRLFIGAPGSWYWQGQTYSIPPDAKFPFKPPLYQPFGTGGMASSHDVTRPENQVFST 267

Human   235 NDEVIMNRRYTYLGYAVTAGHFSHPSTIDVVGGAPQDKG-IGKVYIFRADRRSGTLIKIFQASGK 298
            ::...:|.. :||||::..|.|....:.||..|.|:... :|::.:.|     ..:..||..:|:
  Fly   268 SESASVNDD-SYLGYSMVTGDFDGDRSEDVAIGMPRGGNLVGRIVVNR-----WNMANIFNITGR 326

Human   299 KMGSYFGSSLCAVDLNGDGLSDLLVGAPMFSEIRD-EGQV---TVYINRGNGALEEQLALT---G 356
            ::|.|||.||...|::||||.|||:||||:::..: ||:.   .|||....|..||:...|   .
  Fly   327 QIGEYFGYSLATSDVDGDGLDDLLIGAPMYTDPDNVEGKYDVGRVYILLQGGPTEEKRWTTEHIR 391

Human   357 DGAYN-AHFGESIASLDDLDNDGFPDVAIGAPKE-DDFAGAVYIYHGDAGGIVPQYSMKLSGQKI 419
            ||.:: ..||.::.:|.|::.||:.|.|:|||.: .:..|.|||:||...|.:.:.|..:..:::
  Fly   392 DGYHSKGRFGLALTTLGDVNGDGYGDFAVGAPYDGPEGRGVVYIFHGSPMGPLAKPSQIIKSEQL 456

Human   420 ---NPVLRMFGQSISGGIDMDGNGYPDVTVGAFMSDSVVLLRARPVITVDV-SIFLPGS--INIT 478
               .|..|.||.::|||:|||||.|||:.|||:.||.|.:.::|||..|:. :.|...|  |::.
  Fly   457 VEGAPYPRTFGFALSGGLDMDGNTYPDLAVGAYSSDQVFIFKSRPVAAVNAETSFASNSKLISLD 521

Human   479 APQCH--DGQQPVNCLNVTTCFSFHGKHVPGEIGLNYVLMADVAKKEKGQMPRVYFVLLGETMGQ 541
            ...|.  ...:.|.|:.:|||:|:.|:::|.::..:...:.| |||...  ||::| |..|....
  Fly   522 DRSCQLVRDHKKVPCMLLTTCWSYTGRYLPEQLDFDVSWLLD-AKKLLN--PRMFF-LRDEGKNI 582

Human   542 VTEKLQLTYMEETCRHYVAHVKRRVQDVISPIVFEAAYSLSEHVTGEEERELPPLTPVLRWKKG- 605
            ..:.::|.|.::.|.:...::..:|||.::|:..||.|:|         |...||.|::|.::. 
  Fly   583 RNQTIRLNYGQKYCLNETVYLLDKVQDKLTPLEVEARYNL---------RSSRPLDPMVRHRRSI 638

Human   606 -QKIAQKNQTV-------FERNCRSED-CAADLQLQGKLLLSSMDEKTLYLALGAVKNISLNISI 661
             :.:..:|:.:       .::||..:: |..||    ||.:|::|:   || .|:.:.:.:.:.|
  Fly   639 LEPVIDQNREIVLRDAINIQKNCGPDNICEPDL----KLKVSTVDK---YL-FGSPEPLVIEVFI 695

Human   662 SNLGDDAYDANVSFNVSRELFFINMWQ---KEEMGISCE--LLESDF-LKCSVGFPFMRSK-SKY 719
            ||..:||::|........:|.|..:.|   |::..|:|.  ..|::. |||.:|.|....| :.:
  Fly   696 SNTNEDAFEAAFYMVTPPDLQFRKLQQLGEKKDTPITCSPPTPENNHTLKCDIGNPLESGKIAHF 760

Human   720 EFSVIFDTSHLSGEEEVLSFIVTAQSGNTERSESLHDNTLVLMVPLMHEVDTSITGIMSPTSFVY 784
            :.|::.:..:  |......|...|.|.|.|:..|.:||.:...|.:..:.|..|.|...|...:|
  Fly   761 KISLVPEEKY--GSSSSYDFYWEANSTNLEKPGSEYDNKIRQSVGIWVDTDLDIKGTSLPDYQLY 823

Human   785 --GESVDAANFIQLDDLECHFQPINITLQVYNTGPSTLPGSSVSISFPNRLSSGGAEMFHVQEMV 847
              .:..:..|..:.||:..  |.::| .::.|..||.:..:.|.|..|.....|...|:.:.:..
  Fly   824 KADDYKELENATKEDDIGP--QVVHI-YEIRNNRPSIIEEAEVFIHLPYETIVGDPLMYLLNQPE 885

Human   848 VG 849
            .|
  Fly   886 TG 887

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ITGA9NP_002198.2 FG-GAP 1. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 35..96 24/68 (35%)
Int_alpha 44..101 CDD:214549 22/64 (34%)
FG-GAP 2. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 111..174 16/67 (24%)
FG-GAP 3. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 182..232 17/79 (22%)
FG-GAP 4. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 233..289 13/56 (23%)
Int_alpha 244..294 CDD:214549 13/50 (26%)
FG-GAP 5. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 290..349 27/62 (44%)
Int_alpha 300..347 CDD:214549 23/50 (46%)
FG-GAP 6. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 351..408 21/61 (34%)
Int_alpha 361..414 CDD:214549 19/54 (35%)
FG-GAP 7. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 411..474 27/66 (41%)
Int_alpha 425..>466 CDD:214549 22/40 (55%)
Integrin_alpha2 459..903 CDD:285619 103/415 (25%)
GFFKR motif 1005..1009
ifNP_001162777.1 Int_alpha 46..110 CDD:214549 22/64 (34%)
Int_alpha 275..>316 CDD:214549 12/46 (26%)
Int_alpha 398..451 CDD:214549 19/52 (37%)
Int_alpha 466..>497 CDD:214549 19/30 (63%)
Integrin_alpha2 499..893 CDD:285619 103/415 (25%)
DUF2756 <1120..1178 CDD:298627
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165142045
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3637
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.740

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