DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ITGA9 and if

DIOPT Version :10

Sequence 1:NP_002198.2 Gene:ITGA9 / 3680 HGNCID:6145 Length:1035 Species:Homo sapiens
Sequence 2:NP_523378.2 Gene:if / 32661 FlyBaseID:FBgn0001250 Length:1396 Species:Drosophila melanogaster


Alignment Length:912 Identity:257/912 - (28%)
Similarity:442/912 - (48%) Gaps:124/912 - (13%)


- Green bases have known domain annotations that are detailed below.


Human    18 LALVVAGIPAGAYNLDPQRPVHFQGPADSFFGYAVLEH-----FHDNTRWV--LVGAPKAD-SKY 74
            |.|::..:.|..||:|....|.|:..::|.||:::..|     |:.|...|  :|||||.| |:|
  Fly    20 LILLLIAMSAHGYNIDLPSYVRFRQSSNSMFGFSIAMHKGRSGFYGNQNNVSLIVGAPKFDTSRY 84

Human    75 SPSVKSPGAVFKCRVHTNPDRRCTELDMARGKNRGTSCGKTCREDRDDEWMGVSLARQPKADGRV 139
            ...|...|.||||.:: :.|.:....| ::|.||...  |...:.:..:|:|.::|....:| .|
  Fly    85 QQGVTEAGGVFKCSLN-DDDCKLVPFD-SKGNNRNVD--KEVVDRKSYQWLGATVATGRDSD-LV 144

Human   140 LACAHRWKNIYY-----EADHILPHGFCYIIPSNLQAKGRTLIPCYEEYKKKYG-EEHGSCQAGI 198
            :|||.|:  :::     .|..|.|.|.|:  .|:...:...:.||   ....:| ...||||||.
  Fly   145 VACAPRY--VFHTMTPSRAFRIDPVGTCF--TSHNFEEFYEVSPC---RTNNWGYHRQGSCQAGF 202

Human   199 AGFF--TEELVVMGAPGSFYWAG-TIKV--------------------------LNLTDNTYLKL 234
            :...  ....:.:|||||:||.| |..:                          :...:|.....
  Fly   203 SAAINGNGSRLFIGAPGSWYWQGQTYSIPPDAKFPFKPPLYQPFGTGGMASSHDVTRPENQVFST 267

Human   235 NDEVIMNRRYTYLGYAVTAGHFSHPSTIDVVGGAPQDKG-IGKVYIFRADRRSGTLIKIFQASGK 298
            ::...:|.. :||||::..|.|....:.||..|.|:... :|::.:.|     ..:..||..:|:
  Fly   268 SESASVNDD-SYLGYSMVTGDFDGDRSEDVAIGMPRGGNLVGRIVVNR-----WNMANIFNITGR 326

Human   299 KMGSYFGSSLCAVDLNGDGLSDLLVGAPMFSEIRD-EGQV---TVYINRGNGALEEQLALT---G 356
            ::|.|||.||...|::||||.|||:||||:::..: ||:.   .|||....|..||:...|   .
  Fly   327 QIGEYFGYSLATSDVDGDGLDDLLIGAPMYTDPDNVEGKYDVGRVYILLQGGPTEEKRWTTEHIR 391

Human   357 DGAYN-AHFGESIASLDDLDNDGFPDVAIGAPKE-DDFAGAVYIYHGDAGGIVPQYSMKLSGQKI 419
            ||.:: ..||.::.:|.|::.||:.|.|:|||.: .:..|.|||:||...|.:.:.|..:..:::
  Fly   392 DGYHSKGRFGLALTTLGDVNGDGYGDFAVGAPYDGPEGRGVVYIFHGSPMGPLAKPSQIIKSEQL 456

Human   420 ---NPVLRMFGQSISGGIDMDGNGYPDVTVGAFMSDSVVLLRARPVITVDV-SIFLPGS--INIT 478
               .|..|.||.::|||:|||||.|||:.|||:.||.|.:.::|||..|:. :.|...|  |::.
  Fly   457 VEGAPYPRTFGFALSGGLDMDGNTYPDLAVGAYSSDQVFIFKSRPVAAVNAETSFASNSKLISLD 521

Human   479 APQCH--DGQQPVNCLNVTTCFSFHGKHVPGEIGLNYVLMADVAKKEKGQMPRVYFVLLGETMGQ 541
            ...|.  ...:.|.|:.:|||:|:.|:::|.::..:...:.| |||...  ||::| |..|....
  Fly   522 DRSCQLVRDHKKVPCMLLTTCWSYTGRYLPEQLDFDVSWLLD-AKKLLN--PRMFF-LRDEGKNI 582

Human   542 VTEKLQLTYMEETCRHYVAHVKRRVQDVISPIVFEAAYSLSEHVTGEEERELPPLTPVLRWKKG- 605
            ..:.::|.|.::.|.:...::..:|||.::|:..||.|:|         |...||.|::|.::. 
  Fly   583 RNQTIRLNYGQKYCLNETVYLLDKVQDKLTPLEVEARYNL---------RSSRPLDPMVRHRRSI 638

Human   606 -QKIAQKNQTV-------FERNCRSED-CAADLQLQGKLLLSSMDEKTLYLALGAVKNISLNISI 661
             :.:..:|:.:       .::||..:: |..||    ||.:|::|:   || .|:.:.:.:.:.|
  Fly   639 LEPVIDQNREIVLRDAINIQKNCGPDNICEPDL----KLKVSTVDK---YL-FGSPEPLVIEVFI 695

Human   662 SNLGDDAYDANVSFNVSRELFFINMWQ---KEEMGISCE--LLESDF-LKCSVGFPFMRSK-SKY 719
            ||..:||::|........:|.|..:.|   |::..|:|.  ..|::. |||.:|.|....| :.:
  Fly   696 SNTNEDAFEAAFYMVTPPDLQFRKLQQLGEKKDTPITCSPPTPENNHTLKCDIGNPLESGKIAHF 760

Human   720 EFSVIFDTSHLSGEEEVLSFIVTAQSGNTERSESLHDNTLVLMVPLMHEVDTSITGIMSPTSFVY 784
            :.|::.:..:  |......|...|.|.|.|:..|.:||.:...|.:..:.|..|.|...|...:|
  Fly   761 KISLVPEEKY--GSSSSYDFYWEANSTNLEKPGSEYDNKIRQSVGIWVDTDLDIKGTSLPDYQLY 823

Human   785 --GESVDAANFIQLDDLECHFQPINITLQVYNTGPSTLPGSSVSISFPNRLSSGGAEMFHVQEMV 847
              .:..:..|..:.||:..  |.::| .::.|..||.:..:.|.|..|.....|...|:.:.:..
  Fly   824 KADDYKELENATKEDDIGP--QVVHI-YEIRNNRPSIIEEAEVFIHLPYETIVGDPLMYLLNQPE 885

Human   848 VG 849
            .|
  Fly   886 TG 887

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ITGA9NP_002198.2 FG-GAP 1. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 35..96 24/68 (35%)
Int_alpha 44..101 CDD:214549 22/64 (34%)
FG-GAP 2. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 111..174 16/67 (24%)
FG-GAP 3. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 182..232 17/79 (22%)
FG-GAP 4. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 233..289 13/56 (23%)
Int_alpha 244..294 CDD:214549 13/50 (26%)
FG-GAP 5. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 290..349 27/62 (44%)
Int_alpha 300..347 CDD:214549 23/50 (46%)
FG-GAP 6. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 351..408 21/61 (34%)
Int_alpha 361..414 CDD:214549 19/54 (35%)
FG-GAP 7. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 411..474 27/66 (41%)
Int_alpha 425..>466 CDD:214549 22/40 (55%)
Integrin_alpha2 460..903 CDD:462478 103/414 (25%)
GFFKR motif 1005..1009
ifNP_523378.2 Int_alpha 46..110 CDD:214549 22/64 (34%)
Int_alpha 275..>316 CDD:214549 12/46 (26%)
Int_alpha 398..451 CDD:214549 19/52 (37%)
Int_alpha 466..>497 CDD:214549 19/30 (63%)
Integrin_alpha2 500..892 CDD:462478 103/414 (25%)
Glutenin_hmw <1121..1216 CDD:367362
Blue background indicates that the domain is not in the aligned region.

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