DRSC/TRiP Functional Genomics Resources

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Protein Alignment mrj and dnajc3

DIOPT Version :9

Sequence 1:NP_001246364.1 Gene:mrj / 36797 FlyBaseID:FBgn0034091 Length:346 Species:Drosophila melanogaster
Sequence 2:XP_012812335.1 Gene:dnajc3 / 496977 XenbaseID:XB-GENE-997043 Length:504 Species:Xenopus tropicalis


Alignment Length:106 Identity:41/106 - (38%)
Similarity:59/106 - (55%) Gaps:7/106 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 DYYKILDVSRSATDSEVKKAYRKLALKWHPDKNPDNLD--EANKRFRELSEAYEVLSDARKRRIY 65
            ||||||.|.|:|...|:.|||||||.:||||...|..:  :|.|:|.:::.|.|||:|..||..:
 Frog   394 DYYKILGVKRNAKKQEIIKAYRKLAQQWHPDNFQDEEEKKKAEKKFIDIASAKEVLTDPEKRSRF 458

  Fly    66 DA-RATLHKSSNSGSSSSNS----SSYTRYRNGGTGGSSSY 101
            || ...|...|..|:...:.    :.:..:...|:||..|:
 Frog   459 DAGEDPLDPESQQGAGGPHFHRGWNQWQGFNPFGSGGPFSF 499

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mrjNP_001246364.1 DnaJ 2..>66 CDD:223560 32/64 (50%)
DnaJ 3..66 CDD:278647 32/64 (50%)
dnajc3XP_012812335.1 TPR repeat 37..65 CDD:276809
PEP_TPR_lipo 47..>366 CDD:274350
TPR repeat 70..100 CDD:276809
TPR repeat 105..133 CDD:276809
TPR repeat 154..182 CDD:276809
TPR repeat 187..217 CDD:276809
TPR repeat 222..250 CDD:276809
TPR repeat 256..281 CDD:276809
TPR repeat 300..335 CDD:276809
TPR repeat 340..368 CDD:276809
TPR repeat 374..397 CDD:276809 2/2 (100%)
DnaJ 392..>494 CDD:223560 38/99 (38%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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