DRSC/TRiP Functional Genomics Resources

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Protein Alignment mrj and shv

DIOPT Version :10

Sequence 1:NP_725545.2 Gene:mrj / 36797 FlyBaseID:FBgn0034091 Length:346 Species:Drosophila melanogaster
Sequence 2:NP_608525.1 Gene:shv / 33220 FlyBaseID:FBgn0031256 Length:354 Species:Drosophila melanogaster


Alignment Length:200 Identity:62/200 - (31%)
Similarity:90/200 - (45%) Gaps:37/200 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 DYYKILDVSRSATDSEVKKAYRKLALKWHPDKNPDNLDEANKRFRELSEAYEVLSDARKRRIYD- 66
            |:||||:|.::|..:|||||||:||.:.|||||.|:.| |:.:|::|..||||||:..||:.|| 
  Fly    25 DFYKILNVKKNANTNEVKKAYRRLAKELHPDKNKDDPD-ASTKFQDLGAAYEVLSNPDKRKTYDR 88

  Fly    67 -ARATLHKS---SNSGSSSSNSSSYTRYRNGGTGGSSSYGRDYDY---------DYYPGSGY--- 115
             ....|.|.   .:.|...|:......:..||.|......|..|.         :.|.|:..   
  Fly    89 CGEECLKKEGMMDHGGDPFSSFFGDFGFHFGGDGQQQDAPRGADIVMDLYVSLEELYSGNFVEIV 153

  Fly   116 ------GSGSGRRSGNRYQAFTFRNIFEG------------TPFHKMFEKKRRIYDEYGKDGLGD 162
                  ...||.|..|..|....||:..|            .|..|:..::|.:..|. :.|:.|
  Fly   154 RNKPVTKPASGTRKCNCRQEMVTRNLGPGRFQMIQQTVCDECPNVKLVNEERTLEIEV-EQGMVD 217

  Fly   163 RGQSR 167
            ..::|
  Fly   218 GQETR 222

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mrjNP_725545.2 DnaJ 3..66 CDD:395170 34/62 (55%)
shvNP_608525.1 DnaJ_bact 25..345 CDD:274090 61/199 (31%)

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