DRSC/TRiP Functional Genomics Resources

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Protein Alignment mrj and Dnajb13

DIOPT Version :9

Sequence 1:NP_001246364.1 Gene:mrj / 36797 FlyBaseID:FBgn0034091 Length:346 Species:Drosophila melanogaster
Sequence 2:NP_001005885.1 Gene:Dnajb13 / 308857 RGDID:1359131 Length:316 Species:Rattus norvegicus


Alignment Length:233 Identity:61/233 - (26%)
Similarity:86/233 - (36%) Gaps:103/233 - (44%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 VDYYKILDVSRSATDSEVKKAYRKLALKWHPDKNPDNLDEANKRFRELSEAYEVLSDARKRRIYD 66
            :|||.:|.|:|::.|:::||||||||||.||.|:  |...|.:.||:::|||:||||..||.|||
  Rat     3 MDYYAVLQVNRNSEDAQIKKAYRKLALKNHPLKS--NEPTAPEIFRQIAEAYDVLSDPVKRGIYD 65

  Fly    67 ARATLHKSSNSGSSSSNSSSYTRYRNGGTGGSSSYGRDYDYDYYPGSGYGSGSGRRSGNRYQAFT 131
                                             .:|.:         |...|.....|:: ..:|
  Rat    66 ---------------------------------KFGEE---------GLKGGIPLEFGSQ-TPWT 87

  Fly   132 FRNIFEGTPFHKMFEKKRRIYDEYGKDGLGDRGQSRSHARHHYSTHDFDDFDILGGFQFAFRPPE 196
            ...:|.|.                                                       ||
  Rat    88 TGYVFHGN-------------------------------------------------------PE 97

  Fly   197 EVFREFFGIHSPFADLFRDANGHSNGSTSGSSGSRRNG 234
            :||.||||..:||::.| ||.|:......|  |.|..|
  Rat    98 KVFHEFFGGDNPFSEFF-DAEGNDIDLNFG--GLRGRG 132

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mrjNP_001246364.1 DnaJ 2..>66 CDD:223560 34/63 (54%)
DnaJ 3..66 CDD:278647 34/62 (55%)
Dnajb13NP_001005885.1 DnaJ 1..312 CDD:223560 61/233 (26%)
DnaJ 4..65 CDD:278647 34/62 (55%)
DnaJ_C 138..302 CDD:199909
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0714
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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