DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG44243 and Lipt1

DIOPT Version :9

Sequence 1:NP_001188958.1 Gene:CG44243 / 36795 FlyBaseID:FBgn0265178 Length:396 Species:Drosophila melanogaster
Sequence 2:XP_006244877.1 Gene:Lipt1 / 316342 RGDID:1310276 Length:406 Species:Rattus norvegicus


Alignment Length:321 Identity:121/321 - (37%)
Similarity:187/321 - (58%) Gaps:30/321 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 VPDSEIKKS-----VFISQSSDVFTNLALEDWLYKNFDFSRHHVLLLWANDPCVVIGRHQNPFTE 110
            ||.:..|..     :..|.|:||:.|||:|||::.:.......:|.||.|.|.|||||||||:.|
  Rat    54 VPTAGFKSPPTHGLILQSISNDVYENLAVEDWIHDHIHLEGKPILFLWRNSPSVVIGRHQNPWQE 118

  Fly   111 ANVSQLVERGITLARRNSGGGAVYHDLGNLNCTFFSPRERYDRKYNLNIVTRALFREWAIKAEIN 175
            .|:..:.:.||.||||.||||.||||:||:|.|||:.:.:|||..||.::.|||.   |::.:::
  Rat   119 CNLHLMRQEGIKLARRKSGGGTVYHDMGNINLTFFTTKTKYDRMENLKLIVRALN---AVQPQLD 180

  Fly   176 ----ERDDIVVMNK-KISGTAAKLGHPNSYHHCTILASANKLHLGESLVREPANYI-SKATASVP 234
                ::.|:::..: ||||||:|:|...:|||||:|.|.::..|..|| :.|.:.| |.||.|:|
  Rat   181 VQPTKKFDLLLDGQFKISGTASKIGRTAAYHHCTLLCSTDRTALSSSL-KSPYHGIKSNATPSIP 244

  Fly   235 SPIRNLVDVNRTVNVAQLRSAVGYEYLRTAATTLEDGGSTQTMQQRGFQLVNPT-EKWFPGIEEL 298
            |.::||::.:.|:....|.|||..||  .|...::|          ...|:||. |..||||...
  Rat   245 STVKNLLERDSTLTCDVLMSAVAAEY--AAYHQIDD----------HVNLINPADETVFPGINSK 297

  Fly   299 RSNYSSWDWVIGKTPKFTVQKELEVKGDEQDMKLKLSVEVEAGLMKEIGIQLPQSDQLVPV 359
            .....||:||.|:||:|||.....|...:..:::::.::|:.|.::...|:.|  |..:|:
  Rat   298 IKELQSWEWVYGRTPRFTVDTMFHVPHGQACLEIQVFMDVKNGRIETCDIKAP--DHWLPL 356

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG44243NP_001188958.1 LplA 63..311 CDD:223173 105/254 (41%)
lipoyltrans 60..380 CDD:161920 118/307 (38%)
Lipt1XP_006244877.1 LplA 67..310 CDD:223173 105/258 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166340920
Domainoid 1 1.000 206 1.000 Domainoid score I2816
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H50569
Inparanoid 1 1.050 206 1.000 Inparanoid score I3645
OMA 1 1.010 - - QHG54427
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0003725
OrthoInspector 1 1.000 - - oto95890
orthoMCL 1 0.900 - - OOG6_101366
Panther 1 1.100 - - LDO PTHR12561
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X3085
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1312.900

Return to query results.
Submit another query.