DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment clu and AT1G01320

DIOPT Version :9

Sequence 1:NP_611095.1 Gene:clu / 36793 FlyBaseID:FBgn0034087 Length:1448 Species:Drosophila melanogaster
Sequence 2:NP_171639.3 Gene:AT1G01320 / 839293 AraportID:AT1G01320 Length:1797 Species:Arabidopsis thaliana


Alignment Length:1532 Identity:330/1532 - (21%)
Similarity:557/1532 - (36%) Gaps:468/1532 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    71 KGKKNRNKSPTEPTTEAVLSNGHAEKPTVVDAVEDNADTNANVEKPQEGGAPDAEADGDDIDLDA 135
            |..:.:.|...:...|.||       |.:||.:         |..|.|     .||....|..|.
plant     4 KNNRGKTKGDKKKKEEKVL-------PVIVDVI---------VNLPDE-----TEAILKGISTDR 47

  Fly   136 LQDIGITVNISSPGADLLCVQLSSMELVQEIHQLLMDREETCHRTCFSL--QLDNVTLDNFAELK 198
            :.|                           :.:||....:|||.|.:||  ::....|.:..::.
plant    48 IID---------------------------VRRLLSVNFDTCHVTNYSLSHEIRGSRLKDTVDVS 85

  Fly   199 SINNLEQGSTIKVVEEPYTMREARIHVRHVRDLLKNLDPADAYNGIDCTSLTYLNTITQGDLLDK 263
            ::    :...:.:.||.|....|..|||.:.|:            :.||:               
plant    86 AL----KPCVLTLTEEDYNEGTAVAHVRRLLDI------------VACTT--------------- 119

  Fly   264 KRTRPDSVDCTPPEYVTPGVSDPPILPLHPNVKNAKGPQALKVLTTSAWNPPPGPRK-------- 320
                     |..|   :|..||        :||:|:.....|....|..:|||.|..        
plant   120 ---------CFGP---SPEKSD--------SVKSAQVKGGGKNSKQSDTSPPPSPASKDTVVDEA 164

  Fly   321 ---------------------LHGDLMYLYVVTMED--------------------KRFHISACS 344
                                 |...|.|:.:.|..:                    |..||..|.
plant   165 GETSHSFPKLGSFYEFFSLAHLTPPLQYIRLATKRETEDIAKEDHLLSIDVKLCNGKLVHIEGCR 229

  Fly   345 KGFFINQSTDDTFNPKPDNPSHLSHSLIDLLSHISPSFRRAFQTIQKRRTMRHAFERVATPYQVY 409
            |||:           .......:.|:|:|||..||.:|..|:..:.|..:.|:.|..:...::..
plant   230 KGFY-----------SIGKQRIICHNLVDLLRQISRAFDNAYSDLLKAFSERNKFGNLPYGFRAN 283

  Fly   410 QWAAPILEHTVDAIRAEDAFSSKLGYEEHI-----PGQTRD-------WNEELQTTRELPRKTLP 462
            .|..|     ..|.::..|| ..|..|:..     .||.||       |:.|......:|.||..
plant   284 TWLIP-----PTAAQSPAAF-PPLPVEDERWGGDGGGQGRDGSYDLVPWSNEFAFIASMPCKTAE 342

  Fly   463 ERLLRERAIFKVHGDFVTAATRGAMAVIDGNVLA--INPGEDTKMQMFIWNNIFFSMGFDVRDHY 525
            ||.:|:|.:|.:|..||..||..|:..:. .|:|  :...||::        :.:|.  .|||..
plant   343 ERQVRDRKVFLLHNLFVDVATFRAIKAVQ-KVMAEPVLAEEDSE--------VLYSE--TVRDLT 396

  Fly   526 KELGGD---AAAFVAPRYD-----------------LHGVRVYNAVDIEGLYTLGTVVVDYRGYR 570
            ..:..|   |::.|..:.|                 |.|:..........:.||||:.:.|.||.
plant   397 VTVTRDTSNASSKVDTKIDGIQATGLDKKKLMERNLLKGLTADENTAAHDVATLGTISLKYCGYI 461

  Fly   571 VTAQSIIPGILEREQEQSVVYGSIDFGKTVLSHP-KYLELLRQ--AGKH------LKILPHVVLN 626
            ...:      ||:|.|:             ||.| :.::||.|  .|.:      |:.|.|....
plant   462 AVVK------LEKESEE-------------LSPPSQIVDLLEQPEGGANALNINSLRFLLHKSSP 507

  Fly   627 ERDEPV------ELCSSVECKGIIGNDGRHYILDLLRTFPPDVNFLKLQDVQLSKELVDMGFPIE 685
            |:::..      ||.||           |.::..:|     :.:..||:..::.::.:       
plant   508 EQNKKTPQQHDDELTSS-----------REFVSKML-----EESIAKLEGEEIDRDSI------- 549

  Fly   686 HRHKLCCLRQELLEAFIEDRHVNFIRIAAARLQQLTTIKQSEKSEANPVPALEGAEAASKVNGAE 750
                   :|.||               .|..:|.|...|.:||.:..   ..|.::...||.|..
plant   550 -------MRWEL---------------GACWIQHLQDQKNTEKDKKQ---TGEKSKNELKVEGLG 589

  Fly   751 KP----DDKEKKNEEEEKKERST---------SGEARAAAIV--NAIREAQSNVATSNEVQAAEV 800
            ||    :..:||.:....|...|         |.||..||.:  :|.:.||.||.         :
plant   590 KPLKSLNSSKKKTDVSSPKTPQTALSSQVDAVSSEADTAASLQSDAEKNAQENVL---------I 645

  Fly   801 VKRACAAVGSLKEKEFDFRFNPDVFSPGIRHADGEEGTSLAKQKVLVQEAAEFLVLKQIPAFIKE 865
            :|...:.....:.||.|         .|:.|...:|         ||..|..:.....||..:.:
plant   646 LKNLLSDAAFTRLKESD---------TGLHHKSLQE---------LVDLAQNYYTEVAIPKLVAD 692

  Fly   866 HMSHSSSPIDGQSLTESLHSHGINVRYLGKVIKILSQMPRMDYLHRIAVLELIVRATKHIYYTYM 930
            ..|...||:||::||:.:|:.|:.:|.||.|:|:   ..::.::..:.|.|:||||.|||....:
plant   693 FGSLELSPVDGRTLTDFMHTRGLRMRSLGYVVKL---SDKLSHVQSLCVHEMIVRALKHILQAVI 754

  Fly   931 Q----NTEPLHLSAAISHFLNCLLTNGPVNPAVSSEEAHKKRGNGGKHNKHKSSKGGKGQQQQQT 991
            .    :|:.:.:..|.:  ||.:| ..|.|.|.:            .||                
plant   755 SAVATDTDKIAIKVAAA--LNMML-GIPENVAAT------------PHN---------------- 788

  Fly   992 TGNQNGSSSGSSNSSSASDWTLMTPRSLWQQIRKEAKVYWDWELDCDSIETAVSKYGILRISLMR 1056
                              .|.:......|  :.|..|..:|::|:      |.|...:.:.:::|
plant   789 ------------------PWNVHPLIFRW--LEKFLKKRYDYDLN------AFSYKDLRKFAILR 827

  Fly  1057 AFCLKVGIQVLLREYNFESKHKPTFGDDDIVNVFPI--------VKHISPRATDAYNFYTTGQAK 1113
            ..|.||||:::.|:::.:|  ...|...|:|::.|:        ::..:..:.|......:.:..
plant   828 GLCHKVGIELIPRDFDMDS--PAPFRKTDVVSLVPVHKTFYFKSMQQAACSSADGRQLLESSKTA 890

  Fly  1114 IQQGLFKEGYELISGALNLLNNVFGALHQENGSCLRMLARLSYLLGDAQDALAIQQRAVIMSERV 1178
            :.:|..::.....:.||..|..|.|..|:.......:||.:.|..||...|...||:|:.::||.
plant   891 LDKGKLEDAVTYGTKALAKLVAVCGPYHRMTAGAYSLLAVVLYHTGDFNQATIYQQKALDINERE 955

  Fly  1179 NGMDHPSTILEYTHLSLYSFANGHVGMSLKLLYRARYLMVLICGEDHPEVALIDSNISLILHALG 1243
            .|:|||.|:..|..|:::.:...|..::||.:.||.||:.|.||..||..|....|::::...||
plant   956 LGLDHPDTMKSYGDLAVFYYRLQHTELALKYVKRALYLLHLTCGPSHPNTAATYINVAMMEEGLG 1020

  Fly  1244 EYELSLRFIEHALKLNLKYFGDKDMHVALSYHLMARTQSCMGDFRSALNNEKETYSFYKSQLGEN 1308
            ...::||::..|||.|.:..|...:..|.|||.:|...|.|..:..::.:|:.|....:::||.:
plant  1021 NVHVALRYLHKALKCNQRLLGPDHIQTAASYHAIAIALSLMEAYHLSVQHEQTTLRILRAKLGPD 1085

  Fly  1309 HEKTRDSAECLRLLTQQAVLLQRKMND--------IYSSGKLTSDLPPIHITPPSMGSVLDMLNT 1365
            ..:|:|:|..|.....:|...|....:        |.|.|.|            |:..:||.:|.
plant  1086 DLRTQDAAAWLEYFESKAFEQQEAARNGTPKPDASIASKGHL------------SVSDLLDYINP 1138

  Fly  1366 I--------------NGILFVKISRKD------IVKVRSEIEKHFKTDSTE----------NEVN 1400
            .              |.||.:|...|.      :|::..|.:|....:.||          .|.:
plant  1139 SHNAKGKESVAAKRKNYILKLKEKSKQSNVSEHLVEIPREKQKEMSEEDTEETGSEEGKSSEENH 1203

  Fly  1401 DAINSIVAAANNNGEAEDA--------VSKDIKEQPE 1429
            :.|.:.|....:....|||        .|.|:..:|:
plant  1204 ETILAPVEEPPSPPVIEDATMDNSNPITSSDVSTEPQ 1240

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cluNP_611095.1 CLU_N 159..232 CDD:291703 17/74 (23%)
DUF727 <324..387 CDD:283065 19/82 (23%)
CLU 445..665 CDD:289977 59/263 (22%)
eIF3_p135 872..1073 CDD:289571 47/204 (23%)
TPR_12 1098..1177 CDD:290160 17/78 (22%)
TPR_10 1146..1184 CDD:290111 13/37 (35%)
TPR_12 1183..1261 CDD:290160 27/77 (35%)
TPR repeat 1190..1215 CDD:276809 7/24 (29%)
TPR_12 1225..1303 CDD:290160 22/77 (29%)
TPR repeat 1228..1258 CDD:276809 8/29 (28%)
AT1G01320NP_171639.3 CLU_N 44..115 CDD:291703 19/113 (17%)
CLU 326..>385 CDD:289977 20/59 (34%)
CLU-central 700..844 CDD:271318 46/203 (23%)
TPR_12 918..991 CDD:290160 23/72 (32%)
TPR_10 921..962 CDD:290111 14/40 (35%)
TPR repeat 924..950 CDD:276809 9/25 (36%)
TPR_12 960..1038 CDD:290160 27/77 (35%)
TPR repeat 963..993 CDD:276809 8/29 (28%)
TPR_12 1002..1080 CDD:290160 22/77 (29%)
TPR_10 1005..1046 CDD:290111 11/40 (28%)
TPR repeat 1006..1034 CDD:276809 7/27 (26%)
TPR repeat 1045..1076 CDD:276809 9/30 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1839
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D60958at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12601
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
65.880

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