DRSC/TRiP Functional Genomics Resources

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Protein Alignment clu and AT4G28080

DIOPT Version :9

Sequence 1:NP_611095.1 Gene:clu / 36793 FlyBaseID:FBgn0034087 Length:1448 Species:Drosophila melanogaster
Sequence 2:NP_194537.7 Gene:AT4G28080 / 828923 AraportID:AT4G28080 Length:1819 Species:Arabidopsis thaliana


Alignment Length:1535 Identity:323/1535 - (21%)
Similarity:563/1535 - (36%) Gaps:455/1535 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 AKKKGKKNRNKSPTE--PTTEAVLSNGHAEKPTVVDAVEDNADTNANVEKPQEGGAPDAEADGDD 130
            |.|.||...:||..|  ...|.||       |||::         .:||.|.|          ..
plant     2 APKAGKTKPHKSKGEKKKKEEKVL-------PTVIE---------ISVETPDE----------SQ 40

  Fly   131 IDLDALQDIGITVNISSPGADLLCVQLSSMELVQEIHQLLMDREETCHRTCFSL--QLDNVTLDN 193
            :.|..:                      |.:.:.::.:||....:|||.|.|||  |:....|.:
plant    41 VTLKGI----------------------STDRILDVRKLLAVHVQTCHFTNFSLSHQVRGTKLKD 83

  Fly   194 FAELKSINNLEQGSTIKVVEEPYTMREARIHVRHVRDLLKNLDPADAYNGIDCTSL--------- 249
            ..::.|:....    :.:|||.||..:|..|:|.:.|:            :.||:.         
plant    84 SVDIVSLKPCH----LTIVEEDYTEEQATAHIRRLLDI------------VACTTAFGPSKPPVS 132

  Fly   250 --------------TYLNTITQGDLLDK--------KRTRPDSV----------------DCTPP 276
                          |..::.|:.|..|.        |.:...||                |..||
plant   133 RTLPKDSEKKESGSTDGDSPTEKDAGDSNSGLSPKPKESEKKSVGACEAQSAEGAAKSDIDMCPP 197

  Fly   277 -------EYVTPGVSDPPILPLHPNVKNAKGPQALKVLTTSAWNPPPGPRKLHGDLMYLYVVTME 334
                   |:.:.....|||..:..:|:.:|..:.|                  .||..:.:....
plant   198 TRLGQFYEFFSFSYLTPPIQYIRRSVRPSKEDKGL------------------DDLFQIDIKVSS 244

  Fly   335 DKRFHISACSKGFFINQSTDDTFNPKPDNPSHLSHSLIDLLSHISPSFRRAFQTIQKRRTMRHAF 399
            .|.|.:.|...||:           .|.....|.|||::||..||..|..|:..:.|.....:.|
plant   245 GKPFTVVASRTGFY-----------PPGKQQLLCHSLVELLQQISRPFDAAYDALMKAFIEHNKF 298

  Fly   400 ERVATPYQVYQWAAPIL----EHTVDAIRAED----------AFSSKLGYEEHIPGQTRDWNEEL 450
            ..:...::...|..|.:    ..|..::..||          ..|.|  |::      |.|.:|.
plant   299 GNLPYGFRANTWVVPPVVADSPSTFPSLPVEDETWGGDGGGVGRSGK--YDK------RKWAKEF 355

  Fly   451 QTTRELPRKTLPERLLRERAIFKVHGDFVTAATRGAMAVI----DGNVLAI-NPGEDTKMQMFIW 510
            .....:|.||..||.:|:|..|.:|..||..:...|:.:|    :.|..:: :|.          
plant   356 AILAAMPCKTPEERQVRDRKAFLLHSLFVDVSVFKAVEIIKKIVENNQCSLKDPA---------- 410

  Fly   511 NNIFFSMGFDVRDHYKELGG----------DAAA-----------------FVAPRYDLHGVRVY 548
                 ::||    |.:.:|.          ||:|                 .:|.|..|.|:...
plant   411 -----ALGF----HEERIGDLIVRVARDDPDASAKLDRKSDGTQVLEISQEELAQRNLLKGITAD 466

  Fly   549 NAVDIEGLYTLGTVVVDYRG----------YRVTAQSIIPGI-LEREQEQSVVYGSIDFGKTVLS 602
            .:..:....|||.|||.:.|          :::....|:..| :|.:.|......:::..:|:|.
plant   467 ESATVHDTSTLGVVVVRHCGCTAIVKVASEFKLNDGHILQDIDIEDQSEGGANALNVNSLRTLLH 531

  Fly   603 HPKYLELLRQAGKHLKILPHVVLNERDEPVELCSSVECKGIIGNDGRHYILDLLRTFPPDVNFLK 667
            .......|.|...          |...|.:.:..|:.         |..|.|.|:.       |:
plant   532 KSSTPSSLAQRSP----------NADSEQIRVAKSLV---------RKVIEDSLKK-------LE 570

  Fly   668 LQDVQLSKELVDMGFPIEHRHKLCCLRQELLEAFIEDRHVNFIRIAAARLQQLTTIKQSEKSE-A 731
            ::..:.||       ||         |.||...:::  |:.         .|.::..:|:|:| .
plant   571 IEPSRYSK-------PI---------RWELGACWVQ--HLQ---------NQASSKSESKKTEDP 608

  Fly   732 NPVPALEG--------AEAASKVN--------GAEKP-DDKEKKNEEEEKKERSTSGEARAAAIV 779
            .|.||::|        .|...|::        |.|.| :|.:..:|.|::||.....|       
plant   609 KPEPAVKGLGKQGALLKEIKRKIDVKANKTEQGKEAPANDTDNTSETEDQKELEKQNE------- 666

  Fly   780 NAIREAQSNVATSNEVQAAEVVKRACAAVGSLKEKEFDFRFNPDVFSPGIRHADGEEGTSLAKQK 844
             .|.:....:.|....|             .|||.|..|.                    |...|
plant   667 -EIEKMWKELVTETAYQ-------------RLKESETGFH--------------------LKSPK 697

  Fly   845 VLVQEAAEFLVLKQIPAFIKEHMSHSSSPIDGQSLTESLHSHGINVRYLGKVIKILSQMPRMDYL 909
            .|::.|.::.....:|..:.:..|...||:||::||:.:|:.|:.:..||:|:::..::|   ::
plant   698 ELIEMARKYYTDTALPKLVADFGSLELSPVDGRTLTDFMHTRGLQMHSLGRVVELAEKLP---HV 759

  Fly   910 HRIAVLELIVRATKHIYYTY---MQNTEPLHLSAAISHFLNCLLTNGPVNPAVSSEEAHKKRGNG 971
            ..:.|.|:||||.|||....   ::||  ..::.:|:..||.||.......:|..|:.       
plant   760 QSLCVHEMIVRAYKHILQAVVAAVENT--ADVATSIATCLNVLLGTPSDTESVYDEKI------- 815

  Fly   972 GKHNKHKSSKGGKGQQQQQTTGNQNGSSSGSSNSSSASDWTLMTPRSLWQQIRKEAKVYWDWELD 1036
                                                  .||       |.:.....:..|||:.:
plant   816 --------------------------------------KWT-------WVETFISKRFGWDWKHE 835

  Fly  1037 -CDSIETAVSKYGILRISLMRAFCLKVGIQVLLREYNFESKHKPTFGDDDIVNVFPIVKHISPRA 1100
             |..:.         :.|::|....|||::::.::|..::.:  .|...||:::.|:.||::..:
plant   836 GCQELR---------KFSILRGLSHKVGLELVPKDYEMDTSY--PFKKFDIISMVPVYKHVACSS 889

  Fly  1101 TDAYNFYTTGQAKIQQGLFKEGYELISGALNLLNNVFGALHQENGSCLRMLARLSYLLGDAQDAL 1165
            .|......:.:..:.:|..::.....:.||..|..|.|..|:.......:||.:.|..||...|.
plant   890 ADGRTLLESSKTSLDKGKLEDAVNYGTKALAKLVAVCGPYHRMTAGAYSLLAVVLYHTGDFNQAT 954

  Fly  1166 AIQQRAVIMSERVNGMDHPSTILEYTHLSLYSFANGHVGMSLKLLYRARYLMVLICGEDHPEVAL 1230
            ..||:|:.::||..|:|||.|:..|..|:::.:...|..::||.:.||.||:.|.||..||..|.
plant   955 IYQQKALDINERELGLDHPDTMKSYGDLAVFYYRLQHTELALKYVNRALYLLHLTCGPSHPNTAA 1019

  Fly  1231 IDSNISLILHALGEYELSLRFIEHALKLNLKYFGDKDMHVALSYHLMARTQSCMGDFRSALNNEK 1295
            ...|::::...:....::||::..|||.|.:..|...:..|.|||.:|...|.|..:..::.:|:
plant  1020 TYINVAMMEEGMKNAHVALRYLHEALKCNQRLLGADHIQTAASYHAIAIALSLMDAYSLSVQHEQ 1084

  Fly  1296 ETYSFYKSQLGENHEKTRDSAECLRLLTQQAVLLQRKMND--------IYSSGKLTSDLPPIHIT 1352
            .|....:::||....:|:|:|..|.....:|:..|....:        |.|.|.|          
plant  1085 TTLQILQAKLGPEDLRTQDAAAWLEYFESKALEQQEAARNGTPKPDASISSKGHL---------- 1139

  Fly  1353 PPSMGSVLDMLNTINGILFVKISRKDIVKVRSEIEKHFKTDSTENEVNDAINSIVAAANNNGEAE 1417
              |:..:||.:...:||......||...||:.:..:.....|.||:.:|   .|::.|:..||:.
plant  1140 --SVSDLLDYITPDSGIKARDAQRKARPKVKGKPGQSPGPVSEENQKDD---EILSPAHLTGESS 1199

  Fly  1418 DAVSKDIKEQPEA-GKQLTNGD----------KAAATEAT 1446
            .  .|:.|.:.:: .|::.|.|          |....|||
plant  1200 S--DKENKSETKSEEKKVENFDLEQSKPQDQLKLVKPEAT 1237

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cluNP_611095.1 CLU_N 159..232 CDD:291703 22/74 (30%)
DUF727 <324..387 CDD:283065 18/62 (29%)
CLU 445..665 CDD:289977 50/262 (19%)
eIF3_p135 872..1073 CDD:289571 43/204 (21%)
TPR_12 1098..1177 CDD:290160 17/78 (22%)
TPR_10 1146..1184 CDD:290111 13/37 (35%)
TPR_12 1183..1261 CDD:290160 25/77 (32%)
TPR repeat 1190..1215 CDD:276809 7/24 (29%)
TPR_12 1225..1303 CDD:290160 20/77 (26%)
TPR repeat 1228..1258 CDD:276809 6/29 (21%)
AT4G28080NP_194537.7 CLU_N 47..118 CDD:291703 22/86 (26%)
CLU 351..>402 CDD:289977 15/50 (30%)
CLU-central 726..864 CDD:271318 42/203 (21%)
TPR_12 930..1003 CDD:290160 23/72 (32%)
TPR_10 933..974 CDD:290111 14/40 (35%)
TPR repeat 936..962 CDD:276809 9/25 (36%)
TPR_12 972..1050 CDD:290160 25/77 (32%)
TPR repeat 975..1005 CDD:276809 8/29 (28%)
TPR_12 1014..1092 CDD:290160 20/77 (26%)
TPR_10 1017..1058 CDD:290111 9/40 (23%)
TPR repeat 1018..1046 CDD:276809 5/27 (19%)
TPR repeat 1052..1088 CDD:276809 10/35 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1839
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D60958at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12601
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
54.880

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