Sequence 1: | NP_001246361.1 | Gene: | Lis-1 / 36791 | FlyBaseID: | FBgn0015754 | Length: | 411 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001245503.1 | Gene: | wds / 53428 | FlyBaseID: | FBgn0040066 | Length: | 361 | Species: | Drosophila melanogaster |
Alignment Length: | 317 | Identity: | 94/317 - (29%) |
---|---|---|---|
Similarity: | 165/317 - (52%) | Gaps: | 31/317 - (9%) |
- Green bases have known domain annotations that are detailed below.
Fly 101 KFSLTGHRASITRVIFHPIFALMVSASEDATIRIWDFETGEYERSLKGHTDSVQDVAFDAQGKLL 165
Fly 166 ASCSADLSIKLWDFQQSYECIKTMHGHDHNVSSVAFVPAGDYVLSASRDRTIKMWEVATGYCVKT 230
Fly 231 YTGHREWVRMVRVHIEGSIFATCSNDQTIRVWLTNSKDC-KVELRDHEHTVECIAWAPEAAASAI 294
Fly 295 NEAAGADNKKGHHQGPFLASGSRDKTIRIWDVSVGLCLLTLSGHDNWVRGLAFH---PGGKYLVS 356
Fly 357 ASDDKTIRVWDLRNKRCMKTLYAHQH--FCTSIDFHKAHPYVISGSV--DQTVKVWE 409 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Lis-1 | NP_001246361.1 | LisH | 9..40 | CDD:128913 | |
WD40 | 100..409 | CDD:238121 | 93/315 (30%) | ||
WD40 repeat | 111..148 | CDD:293791 | 11/36 (31%) | ||
WD40 repeat | 154..191 | CDD:293791 | 12/36 (33%) | ||
WD40 repeat | 196..232 | CDD:293791 | 13/35 (37%) | ||
WD40 repeat | 239..274 | CDD:293791 | 11/35 (31%) | ||
WD40 repeat | 280..336 | CDD:293791 | 12/55 (22%) | ||
WD40 repeat | 342..378 | CDD:293791 | 10/38 (26%) | ||
WD40 repeat | 384..408 | CDD:293791 | 7/25 (28%) | ||
wds | NP_001245503.1 | WD40 | 64..358 | CDD:238121 | 93/315 (30%) |
WD40 repeat | 75..112 | CDD:293791 | 11/36 (31%) | ||
WD40 repeat | 118..154 | CDD:293791 | 12/36 (33%) | ||
WD40 repeat | 159..195 | CDD:293791 | 13/35 (37%) | ||
WD40 repeat | 202..237 | CDD:293791 | 11/34 (32%) | ||
WD40 repeat | 244..280 | CDD:293791 | 12/55 (22%) | ||
WD40 repeat | 288..325 | CDD:293791 | 10/36 (28%) | ||
WD40 repeat | 331..357 | CDD:293791 | 7/27 (26%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C45442352 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D64718at33392 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 1 | 1.000 | - | - | otm46811 | |
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.850 |