| Sequence 1: | NP_477160.1 | Gene: | Lis-1 / 36791 | FlyBaseID: | FBgn0015754 | Length: | 411 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | XP_006520761.1 | Gene: | Tbc1d31 / 210544 | MGIID: | 2684931 | Length: | 1061 | Species: | Mus musculus |
| Alignment Length: | 287 | Identity: | 58/287 - (20%) |
|---|---|---|---|
| Similarity: | 116/287 - (40%) | Gaps: | 38/287 - (13%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 102 FSLTGHRASITRVIFHPIFAL---------MVSASEDATIRIWDFETGEYERSLKGHTDSVQDVA 157
Fly 158 FDAQGKLLASCSADLSIKLWD---FQQSYEC-IKTMHGHDHNVSSVAFVPAGDYVLSASRDRTIK 218
Fly 219 MWEVATGYCVKTYTGHRE----WVRMVRVHIEGSIFATCSNDQTIRVWLTNSKDC--KVELRDHE 277
Fly 278 HTVECIAWAPEAAASAINEAAGADNKKGHHQGPFLASGSRDKTIRIWDVSVGLCLLTLSGHDNWV 342
Fly 343 RGLAFHPGGKYLVSASDDKTIRVWDLR 369 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| Lis-1 | NP_477160.1 | LisH | 9..40 | CDD:128913 | |
| WD40 | 100..409 | CDD:238121 | 58/287 (20%) | ||
| WD40 repeat | 111..148 | CDD:293791 | 8/45 (18%) | ||
| WD40 repeat | 154..191 | CDD:293791 | 10/40 (25%) | ||
| WD40 repeat | 196..232 | CDD:293791 | 11/35 (31%) | ||
| WD40 repeat | 239..274 | CDD:293791 | 5/36 (14%) | ||
| WD40 repeat | 280..336 | CDD:293791 | 8/55 (15%) | ||
| WD40 repeat | 342..378 | CDD:293791 | 5/28 (18%) | ||
| WD40 repeat | 384..408 | CDD:293791 | |||
| Tbc1d31 | XP_006520761.1 | WD40 repeat | 43..81 | CDD:293791 | 4/11 (36%) |
| WD40 | <48..336 | CDD:441893 | 58/285 (20%) | ||
| WD40 repeat | 86..123 | CDD:293791 | 8/36 (22%) | ||
| WD40 repeat | 131..164 | CDD:293791 | 9/33 (27%) | ||
| WD40 repeat | 171..211 | CDD:293791 | 12/39 (31%) | ||
| WD40 repeat | 219..255 | CDD:293791 | 5/35 (14%) | ||
| WD40 repeat | 261..290 | CDD:293791 | 6/42 (14%) | ||
| RabGAP-TBC | 461..605 | CDD:480642 | |||
| DUF5401 | <684..>1006 | CDD:375164 | |||
| Blue background indicates that the domain is not in the aligned region. | |||||