DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptp52F and ptprja

DIOPT Version :9

Sequence 1:NP_611093.2 Gene:Ptp52F / 36790 FlyBaseID:FBgn0034085 Length:1433 Species:Drosophila melanogaster
Sequence 2:XP_005166490.1 Gene:ptprja / 559679 ZFINID:ZDB-GENE-030131-8301 Length:1766 Species:Danio rerio


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptp52FNP_611093.2 FN3 648..749 CDD:238020
PTPc 1100..1345 CDD:214550
PTPc 1125..1348 CDD:238006
ptprjaXP_005166490.1 fn3 135..197 CDD:278470
fn3 218..284 CDD:278470
FN3 298..>371 CDD:238020
COG3979 391..543 CDD:226487
fn3 394..469 CDD:278470
fn3 480..550 CDD:278470
fn3 565..631 CDD:278470
fn3 732..806 CDD:278470
fn3 825..899 CDD:278470
FN3 1084..1147 CDD:214495
PTPc 1471..1727 CDD:214550
PTPc 1499..1727 CDD:238006
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

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