DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptp52F and ptpn11b

DIOPT Version :10

Sequence 1:NP_611093.2 Gene:Ptp52F / 36790 FlyBaseID:FBgn0034085 Length:1433 Species:Drosophila melanogaster
Sequence 2:NP_001015717.1 Gene:ptpn11b / 548434 XenbaseID:XB-GENE-6054495 Length:594 Species:Xenopus tropicalis


Alignment Length:508 Identity:148/508 - (29%)
Similarity:215/508 - (42%) Gaps:142/508 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   915 MISQKNCAGVPHLKYDVSSDWPKV-------LSYQEA-------GADGT----------GDCSLE 955
            ::.:|| ..|..|||.::|..|..       ||.:||       |..|:          ||..|.
 Frog    87 LLREKN-GDVIELKYPLNSQDPTSERWYHGHLSGKEAEKLLLDKGKPGSFLVRESQSKPGDFVLS 150

  Fly   956 YQTTEERWHPEPVQRQRR----------DGEVTSDEEIVFTIG----LDKCSEVQKTYCNGPLLP 1006
            ..|:||:.  |..:|:.|          ||:        :.:|    .|..:::...|...|::.
 Frog   151 VLTSEEKL--ENGERKSRVTHVMIRFQPDGK--------YDVGGGERFDTLTDLLDHYKKNPMVE 205

  Fly  1007 DTDYNVVVRL---FTASGYSDAAVLNFKTKAAIKVTLILVSVCSCLLLAFVLGLTVLWVRKRLAW 1068
            .:  ..||.|   |.|:..:.|   |.:|:                            ||:.   
 Frog   206 KS--GAVVHLKQPFNATRINAA---NIETR----------------------------VREL--- 234

  Fly  1069 KRDSGQGIEDPFGNVIAKNFAIFYTEVAKPEKLAREFKEITVVALELSYSASE----LGCHKNRY 1129
                         |..|.|     ||.|| :....||:.:.....:|.|...|    ....||||
 Frog   235 -------------NKTADN-----TEKAK-QGFWEEFEMLQQQECKLLYPRKEGQRPENKSKNRY 280

  Fly  1130 ADIFPYDKNRVIL---DIDAEGSDYINASFID-------GHTRKKEYIATQGPKPESVMDFWRMI 1184
            .:|.|:|..||.|   |....|||||||::|.       |....|.||||||....:|.|||.|:
 Frog   281 KNILPFDTTRVTLRDTDESVAGSDYINANYIKSTLDEARGSQHYKVYIATQGCLQNTVCDFWAMV 345

  Fly  1185 LQYNVRVIVQVTQFREGNTIKCHEYYP----------YNVRGLTVTIKSKEVLELYDRTELTVVH 1239
            .|.|..|||..|:..|.:..||..|:|          ..|:.|.|..|...:|.     ||.:..
 Frog   346 YQENTHVIVMTTKEVERSRKKCFRYWPDENCTKDYGCIRVQSLEVQQKKDYILR-----ELQISR 405

  Fly  1240 -DKYGLKEKVIHYYFKKWPDHGVPEDPMHLIMFVKKVKAEKR--PSYSPIVVHCSAGVGRTGTFI 1301
             ||......:.||.:..|||||||.:|..::.|::::.|.::  |...|||||||||:|||||.|
 Frog   406 MDKVESPRPIWHYQYLSWPDHGVPIEPGGVLSFLEEINAAQKYIPHSGPIVVHCSAGIGRTGTII 470

  Fly  1302 GLDL---IMQRLKSESKINIFETVKKLRFQRMKMVQTQQQYTFLYACTYELVK 1351
            .:|:   |:.|...:..|:|.:|::.:|.||..||||:.||.|:|....:.::
 Frog   471 VIDMLVDIINRQGLDCDIDIPKTIQMVRQQRSGMVQTEAQYKFIYMAVQKYIE 523

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptp52FNP_611093.2 FN3 648..749 CDD:238020
PTPc 1100..1345 CDD:214550 102/274 (37%)
ptpn11bNP_001015717.1 SH2_N-SH2_SHP_like 5..103 CDD:198203 6/16 (38%)
SH2_C-SH2_SHP_like 111..219 CDD:198185 25/119 (21%)
PTPc-N11_6 274..523 CDD:350392 97/253 (38%)
Blue background indicates that the domain is not in the aligned region.

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