DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptp52F and Ptp99A

DIOPT Version :9

Sequence 1:NP_611093.2 Gene:Ptp52F / 36790 FlyBaseID:FBgn0034085 Length:1433 Species:Drosophila melanogaster
Sequence 2:NP_651691.4 Gene:Ptp99A / 43469 FlyBaseID:FBgn0004369 Length:1397 Species:Drosophila melanogaster


Alignment Length:974 Identity:238/974 - (24%)
Similarity:374/974 - (38%) Gaps:264/974 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   552 LEMKNAGSEF----IDLIAFNADYNNS----CP------TIFALFTCNATTQVRNPYAERYVEGH 602
            |....||..|    :|.:..||:...:    ||      .:..|....|:|.:.. :|.|....|
  Fly    29 LPATQAGRIFDVTNLDYVKVNAEAGKNVTIPCPGVNEHSLVDTLVWKTASTTIAQ-FANRIPLLH 92

  Fly   603 S------KQGFNASLSP--LSPYATYVCKVILYNVAGPSEPVVDADMHTTTYFPEQPESVMLEKS 659
            |      ...|....||  .|..:.|:|   |.|.....|.:||..:...   |:.||..:|...
  Fly    93 SPRIQLLSDNFGLQFSPSLASDTSEYIC---LVNDRHIPEAIVDLLVQDV---PDPPERPLLISF 151

  Fly   660 TVSSLLFNW---QPPTYTNGPIKYYQAFLMRHEASYFVPADCAIVEQDTKSETKGD-PSVNFTGL 720
            |..|:..:|   |.|  .|.|:.::  .:...|      .:..|.||..:..||.: .|...|||
  Fly   152 TSRSVNLSWAHSQHP--RNAPVTHF--IIETRE------GEDGIWEQLARIYTKTNATSYQVTGL 206

  Fly   721 APAVRYMMQVAAQNDFGMGVYTEPVIGITLPAVSDS---VTQLTVLTQGPVNNNA--VYEANVTI 780
            .|...|..::.|.|..|:.           |...:|   ||.....|..|:...|  ....:|.|
  Fly   207 TPFTVYSFRLLAVNKLGIS-----------PPSKESYYIVTLREAPTGKPIPTTAHNTSSTSVYI 260

  Fly   781 TWKVPCKSN--GDIEYFQLAF-------NGTRNNFAPVSFERRVELDTGNKQGRMSYTETEMQPQ 836
            :||.|....  |:...:::.:       |.|:..:.     |...:::...|...:||:      
  Fly   261 SWKAPPPDTILGEFLGYRITYRPRDRDPNDTKEIYI-----RDNTVESHEIQNLQTYTQ------ 314

  Fly   837 FDYTVEVSVKNRD-------------------------VEQLSSSVPGSWQSP-------AGLPT 869
              |.|.|.|.|.:                         ::..::|:..||..|       ||...
  Fly   315 --YKVTVQVFNPEGLGPETTILVMTDEGVPSKPQNLTILDVSANSITMSWHPPKNQNGAIAGYHV 377

  Fly   870 I------PSDELIKQMRANVE-----ETSNPTKTAIVRLPADIMTSAS-GDIKWMALMISQKNCA 922
            .      ...|::|..|.:||     |..|.......|:.....|:.: |:   .:..|:|:...
  Fly   378 FHIHDNQTGVEIVKNSRNSVETLIHFELQNLRPYTDYRVIVKAFTTKNEGE---PSDQIAQRTDV 439

  Fly   923 GVP----------HLKYDVSSDWPK-----------VLSYQEAGADGTGDCS------------- 953
            |.|          |.:..::..|.:           ::..:.||.|...|..             
  Fly   440 GGPSAPAIVNLTCHSQESITIRWRRPYEFYNTIDFYIIKTRLAGQDTHRDIRINASAKELETAMI 504

  Fly   954 LEYQTTEERWHPEPVQRQRRDGEVTSDEEIVFTIGLDKCSEVQ----KTYCN--GPLLPDT--DY 1010
            |:..||...:.   |:.......|.:.::||    |.|.||.:    :..|.  .|||..:  ||
  Fly   505 LQNLTTNSYYE---VKVAAATFSVINPKKIV----LGKFSESRIIQLQPNCEKLQPLLRQSHNDY 562

  Fly  1011 NVVVRLFTASGYSDAAVLNFKTKAAIKVTLILVSVC-SCLLLAFVLGLTVLWVRK---------- 1064
            |:.|                           ||.:. ||..:..::....||.||          
  Fly   563 NLAV---------------------------LVGIIFSCFGIILIIMAFFLWSRKCFHAAYYYLD 600

  Fly  1065 ---------RLAWKRDSGQGIEDPFG---NVIAKNFAIFYTEVAKPEKLAREFKEITVVALELSY 1117
                     ::.|:.....|.|....   |..||:.|..:.:  .....:||::     |::...
  Fly   601 DPPHHPNAPQVDWEVPVKIGDEIRAAVPVNEFAKHVASLHAD--GDIGFSREYE-----AIQNEC 658

  Fly  1118 SASELGC---------HKNRYADIFPYDKNRVILDI---DAEGSDYINASFIDGHTRKKEYIATQ 1170
            .:.:|.|         .||||.:|..||.:||.|..   ..:..|||||:||||:.:...:|.||
  Fly   659 ISDDLPCEHSQHPENKRKNRYLNITAYDHSRVHLHPTPGQKKNLDYINANFIDGYQKGHAFIGTQ 723

  Fly  1171 GPKPESVMDFWRMILQYNVRVIVQVTQFREGNTIKCHEYYP------YNVRGLTVTIKSKEVLEL 1229
            ||.|::...|||||.:..|.:||.:|...|....||..|:|      |.|  :.|.:..:||:..
  Fly   724 GPLPDTFDCFWRMIWEQRVAIIVMITNLVERGRRKCDMYWPKDGVETYGV--IQVKLIEEEVMST 786

  Fly  1230 YDRTELTVVHDKYGLKEK--------VIHYYFKKWPDHGVPEDPMHLIMFVKKVKAEKRPSYSPI 1286
            |....|.:.|.|  ||:|        |..|::..|||||.|:.|:.::.||||..|.......||
  Fly   787 YTVRTLQIKHLK--LKKKKQCNTEKLVYQYHYTNWPDHGTPDHPLPVLNFVKKSSAANPAEAGPI 849

  Fly  1287 VVHCSAGVGRTGTFIGLDLIMQRLKSESKINIFETVKKLRFQRMKMVQTQQQYTFLYACTYELV 1350
            |||||||||||||:|.||.::::::.::.:|:|..::.:|.||..:|||::||.||:....|.:
  Fly   850 VVHCSAGVGRTGTYIVLDAMLKQIQQKNIVNVFGFLRHIRAQRNFLVQTEEQYIFLHDALVEAI 913

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptp52FNP_611093.2 FN3 648..749 CDD:238020 26/104 (25%)
PTPc 1100..1345 CDD:214550 100/270 (37%)
PTPc 1125..1348 CDD:238006 95/239 (40%)
Ptp99ANP_651691.4 FN3 140..236 CDD:238020 28/116 (24%)
fn3 249..331 CDD:278470 18/94 (19%)
FN3 342..437 CDD:238020 18/97 (19%)
FN3 442..520 CDD:238020 11/80 (14%)
PTPc 646..911 CDD:214550 100/273 (37%)
PTPc 676..911 CDD:238006 95/238 (40%)
PTPc 935..1186 CDD:214550
PTPc 963..1169 CDD:238006
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 133 1.000 Domainoid score I1104
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm46470
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR19134
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
44.010

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