DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ptp52F and Ptp99A

DIOPT Version :10

Sequence 1:NP_611093.2 Gene:Ptp52F / 36790 FlyBaseID:FBgn0034085 Length:1433 Species:Drosophila melanogaster
Sequence 2:NP_651691.4 Gene:Ptp99A / 43469 FlyBaseID:FBgn0004369 Length:1397 Species:Drosophila melanogaster


Alignment Length:974 Identity:238/974 - (24%)
Similarity:374/974 - (38%) Gaps:264/974 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   552 LEMKNAGSEF----IDLIAFNADYNNS----CP------TIFALFTCNATTQVRNPYAERYVEGH 602
            |....||..|    :|.:..||:...:    ||      .:..|....|:|.:.. :|.|....|
  Fly    29 LPATQAGRIFDVTNLDYVKVNAEAGKNVTIPCPGVNEHSLVDTLVWKTASTTIAQ-FANRIPLLH 92

  Fly   603 S------KQGFNASLSP--LSPYATYVCKVILYNVAGPSEPVVDADMHTTTYFPEQPESVMLEKS 659
            |      ...|....||  .|..:.|:|   |.|.....|.:||..:...   |:.||..:|...
  Fly    93 SPRIQLLSDNFGLQFSPSLASDTSEYIC---LVNDRHIPEAIVDLLVQDV---PDPPERPLLISF 151

  Fly   660 TVSSLLFNW---QPPTYTNGPIKYYQAFLMRHEASYFVPADCAIVEQDTKSETKGD-PSVNFTGL 720
            |..|:..:|   |.|  .|.|:.::  .:...|      .:..|.||..:..||.: .|...|||
  Fly   152 TSRSVNLSWAHSQHP--RNAPVTHF--IIETRE------GEDGIWEQLARIYTKTNATSYQVTGL 206

  Fly   721 APAVRYMMQVAAQNDFGMGVYTEPVIGITLPAVSDS---VTQLTVLTQGPVNNNA--VYEANVTI 780
            .|...|..::.|.|..|:.           |...:|   ||.....|..|:...|  ....:|.|
  Fly   207 TPFTVYSFRLLAVNKLGIS-----------PPSKESYYIVTLREAPTGKPIPTTAHNTSSTSVYI 260

  Fly   781 TWKVPCKSN--GDIEYFQLAF-------NGTRNNFAPVSFERRVELDTGNKQGRMSYTETEMQPQ 836
            :||.|....  |:...:::.:       |.|:..:.     |...:::...|...:||:      
  Fly   261 SWKAPPPDTILGEFLGYRITYRPRDRDPNDTKEIYI-----RDNTVESHEIQNLQTYTQ------ 314

  Fly   837 FDYTVEVSVKNRD-------------------------VEQLSSSVPGSWQSP-------AGLPT 869
              |.|.|.|.|.:                         ::..::|:..||..|       ||...
  Fly   315 --YKVTVQVFNPEGLGPETTILVMTDEGVPSKPQNLTILDVSANSITMSWHPPKNQNGAIAGYHV 377

  Fly   870 I------PSDELIKQMRANVE-----ETSNPTKTAIVRLPADIMTSAS-GDIKWMALMISQKNCA 922
            .      ...|::|..|.:||     |..|.......|:.....|:.: |:   .:..|:|:...
  Fly   378 FHIHDNQTGVEIVKNSRNSVETLIHFELQNLRPYTDYRVIVKAFTTKNEGE---PSDQIAQRTDV 439

  Fly   923 GVP----------HLKYDVSSDWPK-----------VLSYQEAGADGTGDCS------------- 953
            |.|          |.:..::..|.:           ::..:.||.|...|..             
  Fly   440 GGPSAPAIVNLTCHSQESITIRWRRPYEFYNTIDFYIIKTRLAGQDTHRDIRINASAKELETAMI 504

  Fly   954 LEYQTTEERWHPEPVQRQRRDGEVTSDEEIVFTIGLDKCSEVQ----KTYCN--GPLLPDT--DY 1010
            |:..||...:.   |:.......|.:.::||    |.|.||.:    :..|.  .|||..:  ||
  Fly   505 LQNLTTNSYYE---VKVAAATFSVINPKKIV----LGKFSESRIIQLQPNCEKLQPLLRQSHNDY 562

  Fly  1011 NVVVRLFTASGYSDAAVLNFKTKAAIKVTLILVSVC-SCLLLAFVLGLTVLWVRK---------- 1064
            |:.|                           ||.:. ||..:..::....||.||          
  Fly   563 NLAV---------------------------LVGIIFSCFGIILIIMAFFLWSRKCFHAAYYYLD 600

  Fly  1065 ---------RLAWKRDSGQGIEDPFG---NVIAKNFAIFYTEVAKPEKLAREFKEITVVALELSY 1117
                     ::.|:.....|.|....   |..||:.|..:.:  .....:||::     |::...
  Fly   601 DPPHHPNAPQVDWEVPVKIGDEIRAAVPVNEFAKHVASLHAD--GDIGFSREYE-----AIQNEC 658

  Fly  1118 SASELGC---------HKNRYADIFPYDKNRVILDI---DAEGSDYINASFIDGHTRKKEYIATQ 1170
            .:.:|.|         .||||.:|..||.:||.|..   ..:..|||||:||||:.:...:|.||
  Fly   659 ISDDLPCEHSQHPENKRKNRYLNITAYDHSRVHLHPTPGQKKNLDYINANFIDGYQKGHAFIGTQ 723

  Fly  1171 GPKPESVMDFWRMILQYNVRVIVQVTQFREGNTIKCHEYYP------YNVRGLTVTIKSKEVLEL 1229
            ||.|::...|||||.:..|.:||.:|...|....||..|:|      |.|  :.|.:..:||:..
  Fly   724 GPLPDTFDCFWRMIWEQRVAIIVMITNLVERGRRKCDMYWPKDGVETYGV--IQVKLIEEEVMST 786

  Fly  1230 YDRTELTVVHDKYGLKEK--------VIHYYFKKWPDHGVPEDPMHLIMFVKKVKAEKRPSYSPI 1286
            |....|.:.|.|  ||:|        |..|::..|||||.|:.|:.::.||||..|.......||
  Fly   787 YTVRTLQIKHLK--LKKKKQCNTEKLVYQYHYTNWPDHGTPDHPLPVLNFVKKSSAANPAEAGPI 849

  Fly  1287 VVHCSAGVGRTGTFIGLDLIMQRLKSESKINIFETVKKLRFQRMKMVQTQQQYTFLYACTYELV 1350
            |||||||||||||:|.||.::::::.::.:|:|..::.:|.||..:|||::||.||:....|.:
  Fly   850 VVHCSAGVGRTGTYIVLDAMLKQIQQKNIVNVFGFLRHIRAQRNFLVQTEEQYIFLHDALVEAI 913

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptp52FNP_611093.2 FN3 648..749 CDD:238020 26/104 (25%)
PTPc 1100..1345 CDD:214550 100/270 (37%)
Ptp99ANP_651691.4 FN3 140..236 CDD:238020 28/116 (24%)
FN3 243..337 CDD:238020 19/106 (18%)
fn3 343..430 CDD:394996 16/89 (18%)
FN3 442..520 CDD:238020 11/80 (14%)
R5-PTPc-1 704..907 CDD:350397 84/206 (41%)
R5-PTP-2 989..1182 CDD:350398
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.