DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptp52F and Ptpmeg

DIOPT Version :9

Sequence 1:NP_611093.2 Gene:Ptp52F / 36790 FlyBaseID:FBgn0034085 Length:1433 Species:Drosophila melanogaster
Sequence 2:NP_001163309.2 Gene:Ptpmeg / 38059 FlyBaseID:FBgn0261985 Length:974 Species:Drosophila melanogaster


Alignment Length:1048 Identity:219/1048 - (20%)
Similarity:351/1048 - (33%) Gaps:368/1048 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   484 WMEDDKLVEVEALSITTQNTTV----------VFDKNLLACQVYIIQIIPYTKEN-LDGQLRQVG 537
            |::..|..:.:..|::..|..|          |.|.:.|..:....|.....|.| |.|:| ...
  Fly    89 WVDAQKQFKKQCSSVSLDNDAVPLLEFRVKFFVSDPSRLQEEFTRYQFYLQIKRNILLGKL-PCS 152

  Fly   538 VETKAAIVDYTKVKLEMKNAGSEFIDLIAFNA-----DYNNSCPTIFALFTCNATTQVRNPYAER 597
            ..|:..:..||        ..||..|   |||     .|.:....:     |:.||:     |||
  Fly   153 SNTQCLLASYT--------VQSELGD---FNALEHQPGYLSGMQLL-----CDQTTE-----AER 196

  Fly   598 YV-EGHSKQGFNASLSPLSPYATYVCKVILYNVAGPSEPVVDADMHTTTYFPEQPESVMLEKSTV 661
            .| |.|..............|..:..::.||.:          |:|..|  ....:.:.|..|.|
  Fly   197 KVGELHKLHRGQLPADAEYNYLEHAKRLELYGI----------DLHRAT--DSNGKELQLGVSAV 249

  Fly   662 SSLLFNWQPPTYTNGPIKYYQAFLMRHEASYFVPADCAIVEQDTKSETKGDPSVNFTGLAPAVRY 726
            ..|:|.......|....|..:....|.:  :|:             :.:.:||.|:..|.     
  Fly   250 GLLVFQHSLRVNTFSWSKMVKVSFKRKD--FFI-------------QLRREPSENYDTLL----- 294

  Fly   727 MMQVAAQNDFGMGVYTEPVIGITLPAVSDSVTQLTVLTQGPVNNNAVYEANVTITWKVPCKSNGD 791
                    .|||..:                                  .:....|| .|..:. 
  Fly   295 --------GFGMSSH----------------------------------KHAKALWK-SCVEHH- 315

  Fly   792 IEYFQLAFNGTRNNFAPVSFERRVELDTGNK---QGRMSYTETEMQPQFDYTVEVSVKNRDVEQL 853
             .:|:|.        .|....|.:.:..|:|   .||     ||:|     .|:.|         
  Fly   316 -SFFRLK--------RPHRLSRFLNISLGSKFYYSGR-----TELQ-----AVQES--------- 352

  Fly   854 SSSVPGSWQSPAGLPTIPSDELIKQMRANVEETSNPTKTAIVRLPADIMTSASGDIKWMALMISQ 918
                                    :.|..:.:       ..||.|:..:..|:|.:.      :.
  Fly   353 ------------------------KQRGRIHK-------VFVRSPSKRLLGAAGGVG------TS 380

  Fly   919 KNCAGVPHLKYDVSSDWPKVLSYQEAGADGTGDCSLEYQTTEERWHPEPVQRQRRDG------EV 977
            .:..|.|..::..|.......:.:.||| ||    :...|...|.|...|..:..|.      |.
  Fly   381 GSSGGTPMQQHSGSESANSHNNGKPAGA-GT----ILTITKTSRPHDNKVTSKEADSMPRKAWEQ 440

  Fly   978 TSDE-EIVFTIG-LDKC---------SEVQKTYCNGP----LLPDTDYNVVVRLFTASGYSDAAV 1027
            .||| :|...:| :::|         |.:...|.:|.    |||.|..:.|......|| ||...
  Fly   441 QSDEYDIQLDVGFIEQCTRRFESASPSPMPPAYSSGQHSPILLPTTIADAVGHQQPESG-SDLIT 504

  Fly  1028 L----------NFKTKAAIKVTL-ILVS--------------VCSCLLLAFVLGLTVLWVRKR-- 1065
            :          .|..|..:.::| :.||              ||....:..:.|..|..:|..  
  Fly   505 IRLQADEQGRYGFNVKGGVDLSLPVQVSKVVPHTPADRCTPRVCEGDEVLMINGRDVHGLRHEQV 569

  Fly  1066 LAWKRD-----SGQGI--------------EDPFGNVIAKNFAI-----------FYTE------ 1094
            :|..||     ||:.:              |:|....:.::..|           .:|:      
  Fly   570 VAMIRDCRHQASGELLLTVRPQRSAPLLLEEEPLYQYVPESDEIGSHSNLLDGDALFTQSLLLLS 634

  Fly  1095 --------VAKPEKLAREFKEITVVALELSYSASELGCHKNRYADIFPYDKNRVILDIDAEGSDY 1151
                    :|:.|.:.|:..::.:.......:|.     ||||.||.|||..||.| :::...||
  Fly   635 DGLASGALLAQYELMYRKNPDLAITEARKPANAP-----KNRYRDISPYDCTRVSL-VNSLTGDY 693

  Fly  1152 INASFID-----GHTRKKEYIATQGPKPESVMDFWRMILQYNVRVIVQVTQFREGNTIKCHEYYP 1211
            |||::::     |...:  |||||||...:..|||||:.|.:..::|.:|...|....|||:|:|
  Fly   694 INANYVNMEIPGGAVNR--YIATQGPLASTTTDFWRMVQQESSHLLVMLTTVMESGRQKCHQYWP 756

  Fly  1212 YN------VRGLTVTIKSKEVLELYDRTELTVVHDKYGLKEK-----VIHYYFKKWPDHGVPEDP 1265
            ..      ..|.:|...|    |..|.|. :.|..::.||:|     :.|..:..||||.||.||
  Fly   757 VTGEELQLAEGFSVRCLS----EKPDETG-SFVFREFVLKDKHEQRHIHHMQYLAWPDHCVPSDP 816

  Fly  1266 MHLIMFVKKVKA----------------------------------EKRPSYS------------ 1284
            ...:.|.::|:|                                  |::.:.|            
  Fly   817 NLFLEFTERVRAARNRTLLQEIEESLKQVRLMDADADADENGGLMRERKCAASNGATPEDETPVS 881

  Fly  1285 ------------PIVVHCSAGVGRTGTFIGLDLIMQRLKSESKINIFETVKKLRFQRMKMVQTQQ 1337
                        |::||||||:||||..|.:|..:..:::...:...:.|:.:|.||..|||...
  Fly   882 TSVHQCISAANPPVIVHCSAGIGRTGVLILMDTALALMEAREPVYPLDIVRTMRDQRACMVQNVS 946

  Fly  1338 QYTFLYAC 1345
            ||.|:..|
  Fly   947 QYRFVCEC 954

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptp52FNP_611093.2 FN3 648..749 CDD:238020 16/100 (16%)
PTPc 1100..1345 CDD:214550 88/318 (28%)
PTPc 1125..1348 CDD:238006 87/295 (29%)
PtpmegNP_001163309.2 B41 35..232 CDD:214604 37/174 (21%)
FERM_N 38..102 CDD:286467 2/12 (17%)
FERM_M 125..232 CDD:278785 30/138 (22%)
FERM_C_PTPN4_PTPN3_like 226..320 CDD:270010 25/170 (15%)
FA 333..369 CDD:285894 13/85 (15%)
PDZ_signaling 502..589 CDD:238492 15/86 (17%)
Y_phosphatase 666..955 CDD:278528 88/302 (29%)
PTPc 668..955 CDD:238006 87/300 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45443569
Domainoid 1 1.000 133 1.000 Domainoid score I1104
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.840

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