DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ptp52F and PTPRQ

DIOPT Version :9

Sequence 1:NP_611093.2 Gene:Ptp52F / 36790 FlyBaseID:FBgn0034085 Length:1433 Species:Drosophila melanogaster
Sequence 2:XP_016874762.1 Gene:PTPRQ / 374462 HGNCID:9679 Length:2536 Species:Homo sapiens


Alignment Length:1725 Identity:373/1725 - (21%)
Similarity:594/1725 - (34%) Gaps:560/1725 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 GQTVGSLVAVSESQELAEKVEVTVV-----STVYTLGFSISNEADYSIDK---VICRNGSGSETE 83
            |..|.||::|..|:.:.:.....:.     |....|.|...:..:..|.|   .:.|:....|..
Human   965 GNQVSSLLSVRTSETVPDSAPENITYKNISSGEIELSFLPPSSPNGIIQKYTIYLKRSNGNEERT 1029

  Fly    84 ANAAHVCENLNPCTFYTSVV--SFRSNVSGK-----------------PPPSDQTIYAYTEYKQP 129
            .|...:.:|:.....||..:  ...|.:.|:                 .||.|.::      || 
Human  1030 INTTSLTQNIKVLKKYTQYIIEVSASTLKGEGVRSAPISILTEEDAPDSPPQDFSV------KQ- 1087

  Fly   130 KTTVTSVVATANTIKVTWQTNDRACVESFGITAKATDYTKSFQLLNDKSSQTFVNLSACLTHTIT 194
                    .:..|:|::||..    :|..||....|.|      :.::||...:|::........
Human  1088 --------LSGVTVKLSWQPP----LEPNGIILYYTVY------VWNRSSLKTINVTETSLELSD 1134

  Fly   195 LD--TRNNASVVVDTDATD---------VDTQYAEPGDLVMNV--TNLASGITMITWGDPSEKNC 246
            ||  ...:|.|...|...|         ..|....|.|...:|  .||:|...::.|..||:.|.
Human  1135 LDYNVEYSAYVTASTRFGDGKTRSNIISFQTPEGAPSDPPKDVYYANLSSSSIILFWTPPSKPNG 1199

  Fly   247 ISNYVFKWQRNDCGTDQNQDTTTDVPSTETTNEIDYVTTT------------------------- 286
            |..|...:.||..||.....|..:|     ||:.|.:|.:                         
Human  1200 IIQYYSVYYRNTSGTFMQNFTLHEV-----TNDFDNMTVSTIIDKLTIFSYYTFWLTASTSVGNG 1259

  Fly   287 -------PMETTPDTP-------------SDEVKCEWTDVSSDG--------------------- 310
                   .:.|..|.|             |..:...|...:...                     
Human  1260 NKSSDIIEVYTDQDIPEGFVGNLTYESISSTAINVSWVPPAQPNGLVFYYVSLILQQTPRHVRPP 1324

  Fly   311 --------------KLREYLL-----TDLQGCDLYTFQVFI-NENSTAKASQTFTSAEKLVSAVY 355
                          |..:|:|     |:....|.||.|::| .|....:.|....:.:.|.|   
Human  1325 LVTYERSIYFDNLEKYTDYILKITPSTEKGFSDTYTAQLYIKTEEDVPETSPIINTFKNLSS--- 1386

  Fly   356 EPSPTAYPTQLHWTWFSPQNHPKCVANYSVTLTGPIQRSENKTMNVITEETFAIFDDLDPCGIY- 419
                    |.:..:|..|......:.:|.:||.||     |:..:.||.:.:.|.::|.|..:| 
Human  1387 --------TSVLLSWDPPVKPNGAIISYDLTLQGP-----NENYSFITSDNYIILEELSPFTLYS 1438

  Fly   420 -----------------------LVEIVPNQ----LNGSAGTKYQEQSTVGEDQPSVIQDPVVEA 457
                                   .|.:.|.|    :|.::...:.:.|      ||.:...:|:.
Human  1439 FFAAARTRKGLGPSSILFFYTDESVPLAPPQNLTLINCTSDFVWLKWS------PSPLPGGIVKV 1497

  Fly   458 EAYSMEVSWKTPEYADLCIDGYRLSGWMEDDKLVEVEALSITTQNTTVVFDKNLLACQVYIIQII 522
                  .|:|..|:....|....:||:..:.|||.:|.:|                  .|.|::.
Human  1498 ------YSFKIHEHETDTIYYKNISGFKTEAKLVGLEPVS------------------TYSIRVS 1538

  Fly   523 PYTKENLDGQLRQVGVETKAAIVDYTKVKLEMKNAGSEFIDLIAFNADYNNSCPTIFALFTCNAT 587
            .:||         ||                   .|::|.:::.|..  ..|.|.:.....|.||
Human  1539 AFTK---------VG-------------------NGNQFSNVVKFTT--QESVPDVVQNMQCMAT 1573

  Fly   588 T-----------QVRNPYAERY---VEGHSKQGFNASLSP---------LSPYATYVCKVILYNV 629
            :           :..|....:|   ||.:|     ..:||         |....:||.||.....
Human  1574 SWQSVLVKWDPPKKANGIITQYMVTVERNS-----TKVSPQDHMYTFIKLLANTSYVFKVRASTS 1633

  Fly   630 AGPSEPVVDADMHTTTY---FPEQPESVMLEKSTVSSLLFNWQPPTYTNGPIKYYQAF-----LM 686
            ||..:   ::..|.:|.   .|..|.::.......:|....|..|....|   |:|.:     |.
Human  1634 AGEGD---ESTCHVSTLPETVPSVPTNIAFSDVQSTSATLTWIRPDTILG---YFQNYKITTQLR 1692

  Fly   687 RHEASYFVPADCA-------IVEQDTKSETKGDPSVNFTGLAPAVRYMMQVAAQNDFGMGVYTEP 744
            ..:...:...:|.       :.|.....||       ..||.....|..||||..:.|.|..:..
Human  1693 AQKCKEWESEECVEYQKIQYLYEAHLTEET-------VYGLKKFRWYRFQVAASTNAGYGNASNW 1750

  Fly   745 VIGITLPAVSDSVTQLTVLTQGPVNNNAVYEA---NVTITWKVPCKSNG-----------DIEYF 795
            :...|||...|          ||..|..|...   :::|:|..|....|           |.:.|
Human  1751 ISTKTLPGPPD----------GPPENVHVVATSPFSISISWSEPAVITGPTCYLIDVKSVDNDEF 1805

  Fly   796 QLAFNGTRNNFAPVSFE-RRVELDT-------------------GNKQGRMSYTETEMQP----- 835
            .::|  .::|....:.| :.:|:.|                   |.....|..|..|..|     
Human  1806 NISF--IKSNEENKTIEIKDLEIFTRYSVVITAFTGNISAAYVEGKSSAEMIVTTLESAPKDPPN 1868

  Fly   836 ------------QFDYT------------------------VEVSVKNRDVEQLSS--------- 855
                        :|..|                        ..|.:.|..:.|.::         
Human  1869 NMTFQKIPDEVTKFQLTFLPPSQPNGNIQVYQALVYREDDPTAVQIHNLSIIQKTNTFVIAMLEG 1933

  Fly   856 ---------SVPGSWQSPAGLPTIPSDELIKQMRANVEETSNPT-------------KTAIVRLP 898
                     ||.....:.|| |.:|. .:...::|.....:.||             .|..:|:|
Human  1934 LKGGHTYNISVYAVNSAGAG-PKVPM-RITMDIKAPARPKTKPTPIYDATGKLLVTSTTITIRMP 1996

  Fly   899 ADIMTSASGDIKWMALMISQKNCAGVPHLKYDVSSDWPKVLSYQEAGADGTGDCSLEYQT----- 958
            ....:...|.||.:.::::                         |.||...|:.:..|..     
Human  1997 ICYYSDDHGPIKNVQVLVT-------------------------ETGAQHDGNVTKWYDAYFNKA 2036

  Fly   959 ----TEERWHPEPVQRQRRDGEVTSDEEIVFTIGLDKCSEV---QKTYCNGPLLPDTDY------ 1010
                |.|.: |.|...:.:. :.:.:||| :.||.|....:   :...|||||.|...|      
Human  2037 RPYFTNEGF-PNPPCTEGKT-KFSGNEEI-YIIGADNACMIPGNEDKICNGPLKPKKQYLFKFRA 2098

  Fly  1011 -NVVVRLFTASGYSDAAVLNFKTKAAIKVTLILVSVCSCLLLAFVLGLTVLWVRKRLAWKRDSGQ 1074
             |::.: ||.|.||| .|.......:.:...|::||..|:|...:|| |.::...|:..|:..| 
Human  2099 TNIMGQ-FTDSDYSD-PVKTLGEGLSERTVEIILSVTLCILSIILLG-TAIFAFARIRQKQKEG- 2159

  Fly  1075 GIEDP------------------------------FGNVIAKNFAIF------YTEVAKP----- 1098
            |...|                              :.:...:...||      |.:..||     
Human  2160 GTYSPQDAEIIDTKLKLDQLITVADLELKDERLTRYSSFFFRRKEIFVIQLLSYRKSIKPISKKS 2224

  Fly  1099 -------------EKLAREFKEITVVALELSYSASELGCH--KNRYADIFPYDKNRV--ILDIDA 1146
                         .|...||.|:.....:||.:.::|..:  |||:.:|.||:.|||  |.|...
Human  2225 FLQHVEELCTNNNLKFQEEFSELPKFLQDLSSTDADLPWNRAKNRFPNIKPYNNNRVKLIADASV 2289

  Fly  1147 EGSDYINASFIDGHTRKKEYIATQGPKPESVMDFWRMILQYNVRVIVQVTQFREGNTIKCHEYYP 1211
            .||||||||:|.|:....|:||||||.|.:|.|||||:.:...:.:|.:||..|...|:||:|:|
Human  2290 PGSDYINASYISGYLCPNEFIATQGPLPGTVGDFWRMVWETRAKTLVMLTQCFEKGRIRCHQYWP 2354

  Fly  1212 YNVRGLT-----VTIKSKEVLELYDRTELTVVHDKYGLKEKVIHYYFKKWPDHGVPEDPMHLIMF 1271
            .:.:.:|     |..|..|.::: |.|...:..:::|....|....|..||:|||||:...||.|
Human  2355 EDNKPVTVFGDIVITKLMEDVQI-DWTIRDLKIERHGDCMTVRQCNFTAWPEHGVPENSAPLIHF 2418

  Fly  1272 VKKVKAEKRPSYSPIVVHCSAGVGRTGTFIGLDLIMQRLKSESKINIFETVKKLRFQRMKMVQTQ 1336
            ||.|:|.:....:|::|||||||||||.||.||.:.|.:.....::|:..|.:||.:||.|||..
Human  2419 VKLVRASRAHDTTPMIVHCSAGVGRTGVFIALDHLTQHINDHDFVDIYGLVAELRSERMCMVQNL 2483

  Fly  1337 QQYTFLYACTYELVKHK--------IPRAAL-KMD 1362
            .||.||:.|..:|:.:|        :..:|| |||
Human  2484 AQYIFLHQCILDLLSNKGSNQPICFVNYSALQKMD 2518

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptp52FNP_611093.2 FN3 648..749 CDD:238020 22/112 (20%)
PTPc 1100..1345 CDD:214550 104/253 (41%)
PTPc 1125..1348 CDD:238006 98/231 (42%)
PTPRQXP_016874762.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.