| Sequence 1: | NP_611093.2 | Gene: | Ptp52F / 36790 | FlyBaseID: | FBgn0034085 | Length: | 1433 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | XP_038966081.1 | Gene: | Ptprf / 360406 | RGDID: | 3453 | Length: | 1928 | Species: | Rattus norvegicus |
| Alignment Length: | 1568 | Identity: | 352/1568 - (22%) |
|---|---|---|---|
| Similarity: | 578/1568 - (36%) | Gaps: | 472/1568 - (30%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 19 ILWIAGVQGQTVGSLVAVSESQELAEKVEVTV---------------VSTVYTLGFSISNEADYS 68
Fly 69 IDKVICR----NGSGSETE--ANAAHVCENLNPCTFYTSVVSFR---SNVSGKPPPSDQTIYAYT 124
Fly 125 EYKQPKTTVTSVVA---TANTIKVTWQTNDRACVESFGITAKATDYTKSFQLLNDKSSQTFVNLS 186
Fly 187 ACLTHT---------------ITLDTRNNASVVV----DTDATDVDTQY---AEPGDLVMNVTNL 229
Fly 230 ASGITMI--TWGDPSEKNCISNYVFKWQRNDCGTDQNQDTTTDVPSTETTNEIDYVTT------- 285
Fly 286 ---------TP------METTPDTPSDEVKCEWTDVSS--------------------------- 308
Fly 309 ----------DGKLREYLLTDLQGCDLYT-FQVFINENSTAKASQTFTSAEKLVSAVYEPSPTAY 362
Fly 363 PTQLHWTWFSPQNHPKCVANYSVTLTGPIQRSENKTMNVITEETFAIFDDLDPCGIYLVEI---- 423
Fly 424 -VPN----QLNGSAGTKYQEQSTVGEDQPSVIQDPVV--------EAEAYSMEVSWKTPEYA-DL 474
Fly 475 CIDGYRLSGWMEDDKLVEVEALSITTQNTTVVFDKNLLACQVYIIQIIPYTKENLDGQLRQVGVE 539
Fly 540 TKAAIVDYTKVKLEMKNAGSEFIDLIAFNADYNNSCPTIFALFTCNATTQVRNPYAERYVEGHSK 604
Fly 605 QGFNASLSPLSPYATYVCKVILYNVAGPSEPVVDADMHTTTYFPEQ-----PESVMLEKSTVSSL 664
Fly 665 LFNWQPPTYT--NGPIKYYQAFLMRHEASYFVPADCAIVEQDTKSE-----TKGDPSVNFTGLAP 722
Fly 723 AVRYMMQVAAQNDFGMGVYTEPVIGITLPAVSDSVTQLTVLTQGPVNNNAVYEANVTITWKVPCK 787
Fly 788 SNGDIEYFQLAFNGTRNNFAPVSFERRVELDTGNKQGRMSYTETEMQPQFDYTVEVSVKNRDVEQ 852
Fly 853 LSSSVPGSWQ-------SPAGLP--TIPSDELIKQMR--ANVEETSNPTKTAIVRLPADIMTSAS 906
Fly 907 GDIKWMALMISQKNCAG----VPHLKYDVSSDWPKVLSYQEAGADGTGDCSLEYQTTEERWHPEP 967
Fly 968 VQRQRRDGE------VTSDEEI--VFTIGLDKCSEVQKTYCNGPLLPDTDYNVVV---------- 1014
Fly 1015 RLFTASGYSDAAVLN-------------FKTKAAIKVTLILVSVCSCLLLAFVLGLTVLWVRKRL 1066
Fly 1067 ---AWKRDSGQGIED---------------------------PFGNVIAKNFAIFYTEVA----- 1096
Fly 1097 -KPE---KLAREFKEITVVALELSY--SASELGCHKNRYADIFPYDKNRVIL-DID-AEGSDYIN 1153
Fly 1154 ASFIDGHTRKKEYIATQGPKPESVMDFWRMILQYNVRVIVQVTQFREGNTIKCHEYYPYNVRG-- 1216
Fly 1217 ----LTVTIKSKEVLELYDRTELTVVHDKYGLKEK--VIHYYFKKWPDHGVPEDPMHLIMFVKKV 1275
Fly 1276 KAEKRPSYSPIVVHCSAGVGRTGTFIGLDLIMQRLKSESKINIFETVKKLRFQRMKMVQTQQQYT 1340
Fly 1341 FLYACTYE 1348 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| Ptp52F | NP_611093.2 | FN3 | 648..749 | CDD:238020 | 25/112 (22%) |
| PTPc | 1100..1345 | CDD:214550 | 106/256 (41%) | ||
| PTPc | 1125..1348 | CDD:238006 | 100/232 (43%) | ||
| Ptprf | XP_038966081.1 | I-set | 33..124 | CDD:400151 | |
| Ig strand A | 33..36 | CDD:409353 | |||
| Ig strand A' | 42..45 | CDD:409353 | |||
| Ig strand B | 50..57 | CDD:409353 | |||
| Ig strand C | 63..68 | CDD:409353 | |||
| Ig strand C' | 71..73 | CDD:409353 | |||
| Ig strand D | 80..84 | CDD:409353 | |||
| Ig strand E | 86..93 | CDD:409353 | |||
| Ig strand F | 103..111 | CDD:409353 | |||
| Ig strand G | 114..124 | CDD:409353 | |||
| IgI_2_RPTP_IIa_LAR_like | 136..232 | CDD:409400 | |||
| Ig strand B | 152..156 | CDD:409400 | |||
| Ig strand C | 165..169 | CDD:409400 | |||
| Ig strand E | 196..200 | CDD:409400 | |||
| Ig strand F | 210..215 | CDD:409400 | |||
| Ig strand G | 222..225 | CDD:409400 | |||
| IgI_3_RPTP_IIa_LAR_like | 245..326 | CDD:409401 | 7/31 (23%) | ||
| Ig strand B | 259..263 | CDD:409401 | |||
| Ig strand C | 272..276 | CDD:409401 | |||
| Ig strand E | 293..297 | CDD:409401 | 1/2 (50%) | ||
| Ig strand F | 305..310 | CDD:409401 | 0/4 (0%) | ||
| Ig strand G | 318..321 | CDD:409401 | 0/2 (0%) | ||
| FN3 | 329..418 | CDD:238020 | 20/93 (22%) | ||
| FN3 | 425..517 | CDD:238020 | 19/104 (18%) | ||
| FN3 | 522..611 | CDD:238020 | 20/94 (21%) | ||
| FN3 | 619..713 | CDD:238020 | 17/124 (14%) | ||
| FN3 | 720..826 | CDD:238020 | 27/123 (22%) | ||
| FN3 | 831..920 | CDD:238020 | 24/144 (17%) | ||
| FN3 | 929..1017 | CDD:238020 | 23/104 (22%) | ||
| FN3 | 1026..>1085 | CDD:238020 | 16/84 (19%) | ||
| PTP_DSP_cys | 1356..1631 | CDD:421693 | 110/277 (40%) | ||
| R-PTP-F-2 | 1633..1923 | CDD:350477 | |||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 1 | 1.100 | - | - | O | PTHR19134 |
| Phylome | 1 | 0.910 | - | - | ||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 1 | 1.000 | - | - | ||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 3 | 3.010 | |||||