DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptp52F and Y71G12B.31

DIOPT Version :9

Sequence 1:NP_611093.2 Gene:Ptp52F / 36790 FlyBaseID:FBgn0034085 Length:1433 Species:Drosophila melanogaster
Sequence 2:NP_001293450.1 Gene:Y71G12B.31 / 3565511 WormBaseID:WBGene00044348 Length:423 Species:Caenorhabditis elegans


Alignment Length:418 Identity:117/418 - (27%)
Similarity:174/418 - (41%) Gaps:118/418 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly  1040 LILVSVCSCLLLAFVLGLTVLWV-RKRLAWKRDSGQG-----------IEDPFG---NVIAKNFA 1089
            :|:..:.:.:||...:...:|:| .|..:..|.:.:|           :|:|..   .|..|..|
 Worm     6 IIIACLAASMLLMCCVTCFILYVYHKTSSRLRRASRGRTPKQVQQLPKVEEPAPPPVEVTTKEIA 70

  Fly  1090 IFYTEVA-------------------KPEKLAREFKEI----TVVALELSYSASEL--------- 1122
            :.....|                   :|:||..:..::    :.:|:|..|||...         
 Worm    71 VIAAAAAADGKNQINGFQKISTPAAKRPDKLRIDTNKVCPAQSAIAMETDYSADSFLASMTKEST 135

  Fly  1123 ------------------------------GCHKNRYADIFPYDKNRVILDIDAEGSDYINASFI 1157
                                          ....|||:||.|||...|.||.    .|||||||:
 Worm   136 NRRRLLQDEFLVLSRTEARRLTRSTDRATRHAAANRYSDIVPYDHTLVELDT----GDYINASFV 196

  Fly  1158 DGHTRKKEYIATQGP-------KPESVMDFWRMILQYNVRVIVQVTQFREGNTIKCHEYYPYNVR 1215
            .|.:....:||||||       ..|:|.||||||:||:|..||.:.|.:|....||.||:| :..
 Worm   197 QGESDATRWIATQGPIDSGECIGKETVSDFWRMIVQYDVACIVMLGQHQEDFVQKCGEYWP-SAM 260

  Fly  1216 GLTVTIKSKEVLELYDRTELTVVHDKYGLKE-----------------------KVIHYYFKKWP 1257
            |.|......:|..:.:..|.|.||.::.:..                       ||..:.:|:|.
 Worm   261 GKTERYGEVDVKLVCELEEKTWVHREFDVSPTSSYSSSTKSSRKSRASRQQSHMKVSQWQYKEWK 325

  Fly  1258 DHGVPEDPMHLIMFVKKVKAEKRPSYSPIVVHCSAGVGRTGTFIGLDLIMQRLKSESKINIFETV 1322
            |.|......:.:.|:.:|:.  |...||||||||||:||||.||..|.::.|.:||..|:||..|
 Worm   326 DTGGAPRIANFLEFLLQVRG--RQYTSPIVVHCSAGIGRTGVFICTDNVISRFESEGIIDIFSEV 388

  Fly  1323 KKLRFQRMKMVQTQQQYTFLYACTYELV 1350
            .:.|.||..||.|.:|    |.|.|:::
 Worm   389 NRSRQQRPSMVYTVKQ----YECIYDII 412

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptp52FNP_611093.2 FN3 648..749 CDD:238020
PTPc 1100..1345 CDD:214550 100/317 (32%)
PTPc 1125..1348 CDD:238006 94/252 (37%)
Y71G12B.31NP_001293450.1 PTPc 170..414 CDD:238006 95/254 (37%)
Y_phosphatase 170..412 CDD:278528 95/252 (38%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR19134
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
33.010

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