DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptp52F and Pez

DIOPT Version :9

Sequence 1:NP_611093.2 Gene:Ptp52F / 36790 FlyBaseID:FBgn0034085 Length:1433 Species:Drosophila melanogaster
Sequence 2:NP_001260127.1 Gene:Pez / 33882 FlyBaseID:FBgn0031799 Length:1252 Species:Drosophila melanogaster


Alignment Length:1160 Identity:215/1160 - (18%)
Similarity:370/1160 - (31%) Gaps:367/1160 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   404 EETFAIFDDLDP---CGIYLVEIVPNQLNGSAGTKYQEQSTVGEDQPSV------------IQDP 453
            ||.||..|.|..   .|:.:..:|.|..||.....::|..||..|:.::            |...
  Fly   227 EERFAAKDTLGNDLLLGLAINGMVVNADNGRQYFPWKEFHTVTIDKRTIKIEQNKLDGGGSIVGS 291

  Fly   454 VVEAEAYSMEVSWK----------------TP---------EYADLCIDGYRLSGWMEDD----- 488
            .:.:||.:....||                ||         |...|.:|..   |:::.|     
  Fly   292 FIFSEADTARYFWKLTISQHKFFKRYIDTATPSSLGSGADAESGPLGVDSV---GYVDYDYNEAA 353

  Fly   489 ----------------KLVEVEALSITTQNTTVVFDKNLLACQVYIIQIIPYTKENL---DGQLR 534
                            :..:::...:.:.|.::....|.:..|  ....:..:..||   .|.|.
  Fly   354 AAEQLQQHHQQQQHMQQQQQIQQQQMISSNISLATSANQMLGQ--SSSCLDLSNNNLHSSSGMLH 416

  Fly   535 QVGVET----------KAAIVDY-------TKVKLEMKNAGSEFIDL-IAF----NADYNNSCPT 577
            ..|...          ||.:..|       |.|:|:.:...:||.:: :|.    ||.|..|.| 
  Fly   417 HGGSNNNNNNDERERLKAMLPTYRPAPDYETAVQLKYRTPSAEFHNVALAMAAPGNAYYAGSQP- 480

  Fly   578 IFALFTCNATTQVRNP--YAERYVEGHSKQGFNASLSPLSPYATYVCKVILYNVAGPSEPVVDAD 640
                       .|.||  :.|..:.||                     :..:.....::|.....
  Fly   481 -----------DVHNPGMHNENLLYGH---------------------MTAHRYPDVAQPAAALH 513

  Fly   641 MHTTTY----------FPEQPESVMLEKSTVSSLLFNWQPPTYTNGPIKYYQAFLMRHEASYFVP 695
            .|...|          .|..|....||.|....::.:..||.|.|            ..:|...|
  Fly   514 HHINLYQAQHQPQSHPQPMSPAQAYLELSQRMHMMRHKAPPPYVN------------RLSSSSTP 566

  Fly   696 ADCAIVE----QDTKSETKGD-------------------PSVNFTGLAP-----AVRYMMQVAA 732
             |.|:..    |..::...|.                   |:....|..|     .:.:..|..:
  Fly   567 -DLAVATPRPLQGFRNYVSGSSPDLVSNRTLFNGGQYVALPAGGHAGNIPTSSGATMLHQYQYVS 630

  Fly   733 QNDFGMGVYTEPVI---GI--TLPAVSDSVTQLTVLTQGPVNNNAVYEANVTITWKVPCKSNGDI 792
            .    || :::|.:   |.  .|..:.:..:.::.|.|..::..|...|...:|...|       
  Fly   631 H----MG-HSQPYLPPHGTFENLNMIEEQPSIMSQLRQSAMSQAAAAAAGSVVTQSSP------- 683

  Fly   793 EYFQLAFNGTRNNFAP----------VSFERRVELDTGNKQGRMSYTETEMQPQFDYTVEVSVKN 847
               .|..:|.|::..|          |:...:            |.|...:|.        |:.|
  Fly   684 ---TLPPSGYRSSVPPPASSPLPPPVVASSHK------------SATPAPLQR--------SLVN 725

  Fly   848 RDVEQLSSSVPGSWQSPAGLPTIPSDELIKQMRANVEE-------------TSNPTKTAIVRLPA 899
            ..:|.:..:||...::..|.....:.|.::|..::::.             :||...|..|..|.
  Fly   726 GSIEPIYENVPLPQRASGGSSGAANTEAMRQRASSIQSAPGVVPVPAARNASSNNVVTVTVNSPP 790

  Fly   900 DIMTSASGDIKWMALMISQKNCAGVPHLKYDVSSDWPKVLSYQEAGADGTGDCSLEYQTTEERWH 964
            |     .|:||                 ||               |||......|.:      ..
  Fly   791 D-----DGNIK-----------------KY---------------GADRAASTELLF------LE 812

  Fly   965 PEPVQRQRRDGEVTSD-------EEIVFTIGLDKCSEVQKTYCNGPLLPDTDYNVVVRLFTASGY 1022
            |:..:|..|......|       .:...|..|:|.|.|..      :.|..|  .:.:.|:|...
  Fly   813 PQAPKRTNRAASAAPDMGATPPPRQHRSTASLNKSSTVDM------ITPAGD--TLQQQFSAMNL 869

  Fly  1023 SDAAVLNFKTKAAIKVTLILVSVCSC--------------------LLLAFVLG---LTVLWVRK 1064
            |  |..:..|.:....||...|..:.                    ...:..||   .|......
  Fly   870 S--ANTSASTSSMFNSTLDTTSSSAASKDLKRKKRWNFLSRSKTPDKQKSATLGREKATTAGQHS 932

  Fly  1065 RLAWKRDSGQ-----------GIEDP---FGNVIAKNFAIFYTEVAKPEKLAREFKEITVVALEL 1115
            :||.|....|           |:..|   .|............:.....:|..||:.|.......
  Fly   933 KLAAKLKLAQDDLNLPNRWSTGVNKPQPISGRYSKDKLCQILDQKLSDSQLFMEFERIPKRREHA 997

  Fly  1116 SYSAS--ELGCHKNRYADIFPYDKNRVILDIDAEG-SDYINASFIDG--HTRKKEYIATQGP-KP 1174
            .|..:  |....||...:..|||.|||.|....:. ..|:|||.|..  .|:::.||..|.| :|
  Fly   998 LYECALLEENEPKNHDPNFLPYDDNRVRLTPCRDNRHGYVNASSISATVGTKQRFYIVAQSPQEP 1062

  Fly  1175 ESVMDFWRMILQYNVRVIVQVTQ---FREGNTIKCHEYYPYNVRGLTVTIKSKEVLELYDR---T 1233
            .::..||:.:.:.:|.::||:|:   :...|:.:..|:..:.|        .:|..:..||   .
  Fly  1063 LTMRIFWQCVWEADVYLVVQLTEDMSYIPRNSHQRLEFGQFQV--------YQEFSQTTDRCTTI 1119

  Fly  1234 ELTVVHDKYGLKEKVIHYYFKKWPDHGVPEDPMHLIMFVKKVKA-------EKRPSYS---PIVV 1288
            :|.:.|........|.:..:..|.:...|.|..|.:.|::::.:       |..|.::   |:::
  Fly  1120 KLRLYHVPSRRYRSVWYLQYADWAEQNCPRDVNHFLDFLEELNSVRLASTQEVPPGHNTNPPVLL 1184

  Fly  1289 HCSAGVGRTGTFIGLDLIMQRLKSESKINIFETVKKLRFQRMKMVQTQQQYTFLY 1343
            ||..|.||:|..:..||::..|.....::|...:.:||.||..::.:..||.|:|
  Fly  1185 HCLEGGGRSGVTLTADLLLYTLDHNEDLDIPRVIGQLRHQRDSIIPSLAQYKFIY 1239

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptp52FNP_611093.2 FN3 648..749 CDD:238020 23/133 (17%)
PTPc 1100..1345 CDD:214550 67/266 (25%)
PTPc 1125..1348 CDD:238006 61/239 (26%)
PezNP_001260127.1 B41 26..230 CDD:214604 2/2 (100%)
FERM_N 26..93 CDD:286467
FERM_M 114..230 CDD:278785 2/2 (100%)
FERM_C_PTPN14_PTPN21 225..317 CDD:270009 20/89 (22%)
Y_phosphatase 1007..1243 CDD:278528 61/241 (25%)
PTPc 1009..1243 CDD:238006 61/239 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45443543
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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