DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptp52F and ptpn11a

DIOPT Version :10

Sequence 1:NP_611093.2 Gene:Ptp52F / 36790 FlyBaseID:FBgn0034085 Length:1433 Species:Drosophila melanogaster
Sequence 2:NP_956140.1 Gene:ptpn11a / 333979 ZFINID:ZDB-GENE-030131-5911 Length:594 Species:Danio rerio


Alignment Length:570 Identity:153/570 - (26%)
Similarity:237/570 - (41%) Gaps:184/570 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   916 ISQKNCAGVPHLKYDV------SSDW----------PKVLSYQEAGADGTGDCSLEYQTTEERWH 964
            :.:|| ..|..|||.:      |..|          .|:|:  |.|.:|:      :...|.:.|
Zfish    88 LKEKN-GDVIELKYPLNCADPTSERWFHGHLSGREAEKLLT--EKGKNGS------FLVRESQSH 143

  Fly   965 PEPVQRQRRDGEVTSD----------------EEIVFTIG----LDKCSEVQKTYCNGPLLPDTD 1009
            |.......|.|:..:|                .::.:.:|    .|..:::.:.|...|::.   
Zfish   144 PGDFVLSVRTGDDKTDTSEGKPKVTHVMIRCQHDLKYDVGGGEKFDSLTDLVEHYKKNPMVE--- 205

  Fly  1010 YNVVVRLFTASGYSDAAVLNFKTKAAIKVTLILVSVCSCLLLAFVLGLTVLWVRKRLAWKRDSGQ 1074
                                                        .|| |||.:::.|        
Zfish   206 --------------------------------------------TLG-TVLQLKQPL-------- 217

  Fly  1075 GIEDPFGNVIAKNFAIFYTEVAKPEKLA-----------REFKEITVVALELSYSASE----LGC 1124
                   |....|.|...:.|.:..|||           .||:.:.....:|.||..|    ...
Zfish   218 -------NTTRINAAEIESRVRELSKLAEATDKVKQGFWEEFETLQQQECKLLYSRKEGQRPENK 275

  Fly  1125 HKNRYADIFPYDKNRVIL---DIDAEGSDYINASFI--DGHTR------KKEYIATQGPKPESVM 1178
            :||||.:|.|:|..||:|   |::.:|||||||:.|  |...:      |:.||||||....::.
Zfish   276 NKNRYKNILPFDHTRVVLTDGDVNEQGSDYINANLIMPDNEAKSNNSKLKRSYIATQGCLQNTIS 340

  Fly  1179 DFWRMILQYNVRVIVQVTQFREGNTIKCHEYYPYNVRGLTV--TIKSKEVLELYDRTELTVVHDK 1241
            |||||:.|.|.||||..|:..|....||.:|:| :|..|..  .::.:.|.|       |:.|| 
Zfish   341 DFWRMVFQENSRVIVMTTKEVERGKSKCVKYWP-DVSALKEYGAMRVRNVKE-------TMAHD- 396

  Fly  1242 YGLKE-------------KVIHYYFKKWPDHGVPEDPMHLIMFVKKVKAEKR--PSYSPIVVHCS 1291
            |.|:|             .|..|:|:.|||||||.||..::.|:::||.::.  ....|||||||
Zfish   397 YILRELKLSKVGQGNTERTVWQYHFRAWPDHGVPGDPGGVLDFLEEVKLKQEGITGAGPIVVHCS 461

  Fly  1292 AGVGRTGTFIGLDLIMQRLKS---ESKINIFETVKKLRFQRMKMVQTQQQYTFLYACTYELVKHK 1353
            ||:|||||||.:|:::..::.   :..|::.:|::.:|.||..||||:.||.|:|..    |:|.
Zfish   462 AGIGRTGTFIVIDILIDIIREKGVDCDIDVPKTIQMVRSQRSGMVQTEAQYRFIYMA----VQHY 522

  Fly  1354 IPRAALKMDGRPKSVTVPAIPSPKKVSFPDVDVGSEYVS-SAPITDLDDG 1402
            |.....:::...||          |:.      |.||.: ...::||..|
Zfish   523 IETLQRRIEEEQKS----------KIK------GREYTNIKYSLSDLSGG 556

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptp52FNP_611093.2 FN3 648..749 CDD:238020
PTPc 1100..1345 CDD:214550 108/290 (37%)
ptpn11aNP_956140.1 SH2_N-SH2_SHP_like 5..103 CDD:198203 6/15 (40%)
SH2_C-SH2_SHP_like 111..219 CDD:198185 22/178 (12%)
PTPc-N11 273..525 CDD:350453 102/264 (39%)
Blue background indicates that the domain is not in the aligned region.

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