DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptp52F and Ptp10D

DIOPT Version :9

Sequence 1:NP_611093.2 Gene:Ptp52F / 36790 FlyBaseID:FBgn0034085 Length:1433 Species:Drosophila melanogaster
Sequence 2:NP_996413.2 Gene:Ptp10D / 32115 FlyBaseID:FBgn0004370 Length:1990 Species:Drosophila melanogaster


Alignment Length:1763 Identity:372/1763 - (21%)
Similarity:626/1763 - (35%) Gaps:596/1763 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 LGFSISNE------ADYSID-----------KVICRNGSGSETEANAAHVCENLNPCTFYTSV-- 102
            |..||.|.      |.|.:|           ..|.....|.|.:.:.|......|...:||:.  
  Fly    45 LAISIPNNPGLDDGASYRLDYSPPFGYPEPNTTIASREIGDEIQFSRALPGTKYNFWLYYTNFTH 109

  Fly   103 ---VSFRSNVSGKP-PPSDQTIYAYTEYKQPKTTV------TSVVATANTIKVTWQTNDRACVES 157
               :::...::..| |||:.::    :.:..|..:      |....||..|||            
  Fly   110 HDWLTWTVTITTAPDPPSNLSV----QVRSGKNAIILWSPPTQGSYTAFKIKV------------ 158

  Fly   158 FGITAKATDYTKSFQLLNDKSSQTFV-NLSACLTHTITLDTRNNASVVVDTDATDVDTQYAEPGD 221
            .|::..::.|.::|| :||.:.|..| .|:...|:.:...|..:....|...:.:..|:...||.
  Fly   159 LGLSEASSSYNRTFQ-VNDNTFQHSVKELTPGATYQVQAYTIYDGKESVAYTSRNFTTKPNTPGK 222

  Fly   222 LVM---NVTNLASGITMITWGDPSEKNCISNYVFKWQ---RNDCGTDQNQDTTTDVPS------- 273
            .::   |.|.|     ::.|..|......::|....:   .||......::.....|:       
  Fly   223 FIVWFRNETTL-----LVLWQPPYPAGIYTHYKVSIEPPDANDSVLYVEKEGEPPGPAQAAFKGL 282

  Fly   274 -----------TETTNEIDYVTTTPMETTPDTPSDEVKCEWTDVSSDGKLREYLLTD-------- 319
                       |.:.:||...||....|.|..|        .:|:.|   |:::.::        
  Fly   283 VPGRAYNISVQTMSEDEISLPTTAQYRTVPLRP--------LNVTFD---RDFITSNSFRVLWEA 336

  Fly   320 ---LQGCDLYTFQV-----------------FINENSTAKASQTFTSAEKLVSAVYEPSPTAYPT 364
               :...|.|...|                 |.:....|:..:||....|.||.    ..|::| 
  Fly   337 PKGISEFDKYQVSVATTRRQSTVPRSNEPVAFFDFRDIAEPGKTFNVIVKTVSG----KVTSWP- 396

  Fly   365 QLHWTWFSPQNHPKCVANYSVTLTGPIQRSENKTMNVITEETFAIFDDLDPCGI---YLVEIVPN 426
                            |...|||. |:.....:::|.....|..|..:.||...   |  .||.:
  Fly   397 ----------------ATGDVTLR-PLPVRNLRSINDDKTNTMIITWEADPASTQDEY--RIVYH 442

  Fly   427 QLNGSAGTKYQEQSTVGEDQPSVIQDPVVEAEAYSMEVSW------------------KTPEYAD 473
            :|....|    :.||:..|:.....:.::....||:.|..                  .:|...|
  Fly   443 ELETFNG----DTSTLTTDRTRFTLESLLPGRNYSLSVQAVSKKMESNETSIFVVTRPSSPIIED 503

  Fly   474 LCIDGYRLS---GWMED--DKLVEVEAL-------SITTQNT--TVVFDKNLLACQVYIIQII-- 522
            |  ...|:.   .|..|  .|..:.|.|       .:.||.|  :.:..|||.....|.:::.  
  Fly   504 L--KSIRMGLNISWKSDVNSKQEQYEVLYSRNGTSDLRTQKTKESRLVIKNLQPGAGYELKVFAV 566

  Fly   523 ----------------PYTKENL------------------DGQLRQVGV--------------- 538
                            |....|:                  .|:..:..:               
  Fly   567 SHDLRSEPHAYFQAVYPNPPRNMTIETVRSNSVLVHWSPPESGEFTEYSIRYRTDSEQQWVRLPS 631

  Fly   539 --ETKAAIVDYTKVKLEMKNAGSEF---IDLIAFNA------DYNNSCPTIFALFTCNATTQV-- 590
              .|:|.|.|.||        |.::   ::.::|..      :.|.:.|.       |..:.:  
  Fly   632 VRSTEADITDMTK--------GEKYTIQVNTVSFGVESPVPQEVNTTVPP-------NPVSNIIQ 681

  Fly   591 ----RN-----PYAERYVEGHSKQGF---------------NASLSPLSPYATYVCKVILYNVAG 631
                ||     |..|..||.:..:.:               |.|...||     ..:|::    |
  Fly   682 LVDSRNITLEWPKPEGRVESYILKWWPSDNPGRVQTKNVSENKSADDLS-----TVRVLI----G 737

  Fly   632 PSEPVVD--ADMHTTTY---------FPE-----QPESVML------EKSTVSSLLFNWQPPTYT 674
            ...|.|.  .|:.||:|         :|.     |.:.|:.      |:.|::   .::.|...:
  Fly   738 ELMPGVQYKFDIQTTSYGILSGITSLYPRTMPLIQSDVVVANGEKEDERDTIT---LSYTPTPQS 799

  Fly   675 NGPIKYYQAFLMRHEASYFVPADCAIVEQDTKSETKGDPSVNFTGLAPAVRYMMQVAAQNDFGMG 739
            :.....|:          |...|..|.::: |.....|..|.||||.|...|             
  Fly   800 SSKFDIYR----------FSLGDAEIRDKE-KLANDTDRKVTFTGLVPGRLY------------- 840

  Fly   740 VYTEPVIGITLPAVSDSVTQLTV----------LTQGPVNNNAVYEANVTITWKVPCKSNGDIEY 794
                   .||:..||..|..|.:          :||....|  :.:..:::.|.:|   .|:...
  Fly   841 -------NITVWTVSGGVASLPIQRQDRLYPEPITQLHATN--ITDTEISLRWDLP---KGEYND 893

  Fly   795 FQLAFNGTRNNFAPVSFERRVELDTGNKQGRMSYTETEMQPQFDYTVEVSVKN-------RDVEQ 852
            |.:|:....|..|.            |...|...|.::::|..:||..|.|::       |....
  Fly   894 FDIAYLTADNLLAQ------------NMTTRNEITISDLRPHRNYTFTVVVRSGTESSVLRSSSP 946

  Fly   853 LSSS------VPG-----------------SWQSP-----------------------AGLPTIP 871
            ||:|      |||                 .|..|                       ||:....
  Fly   947 LSASFTTNEAVPGRVERFHPTDVQPSEINFEWSLPSSEANGVIRQFSIAYTNINNLTDAGMQDFE 1011

  Fly   872 SDE---LIKQMRANVEET-------------------------SNPTKTAIVRLPADIMTSAS-- 906
            |:|   :||.::..  ||                         ..|.:.|...:|.::..|:|  
  Fly  1012 SEEAFGVIKNLKPG--ETYVFKIQAKTAIGFGPEREYRQTMPILAPPRPATQVVPTEVYRSSSTI 1074

  Fly   907 -------------GDIKWMALMISQ---KNCAGVPHLKYDVSSDWPKVLSYQEAGADGTGDCSLE 955
                         |.::...:::::   ||.:|:.      ...|..|.||         ...|.
  Fly  1075 QIRFRKNYFSDQNGQVRMYTIIVAEDDAKNASGLE------MPSWLDVQSY---------SVWLP 1124

  Fly   956 YQTTEERWHPEPVQRQRRDGEVTSDEEIVFTIGLDKCSEVQKTYCNGPLLPDTDYNVVVRLFT-A 1019
            ||..:. ::|         .|..|.|:  ||||.:.|...:..||||||...|.|.|.||.|| |
  Fly  1125 YQAIDP-YYP---------FENRSVED--FTIGTENCDNHKIGYCNGPLKSGTTYRVKVRAFTGA 1177

  Fly  1020 SGYSDAAVLNFKTKAAIKVTLILVSVCSCLLLAFVLGLTVLWVRKRLAWKRDSGQGIEDPFGN-- 1082
            ..::|.| .:|..:.....|.::|::...|.:..||.:|:|:.::|   :.:..:..:|...|  
  Fly  1178 DKFTDTA-YSFPIQTDQDNTSLIVAITVPLTIILVLLVTLLFYKRR---RNNCRKTTKDSRANDN 1238

  Fly  1083 -------------VIAKNFAIFYTEVAKPE--KLAREFKEITVVALELSYSASELGCH--KNRYA 1130
                         ::.||||..|..::...  :.:.||:|:..|..:...:.::|.|:  |||:.
  Fly  1239 MSLPDSVIEQNRPILIKNFAEHYRLMSADSDFRFSEEFEELKHVGRDQPCTFADLPCNRPKNRFT 1303

  Fly  1131 DIFPYDKNRVILD--IDAEGSDYINASFIDGHTRKKEYIATQGPKPESVMDFWRMILQYNVRVIV 1193
            :|.|||.:|..|.  .|.||||||||:::.||...:|:|.||||...:..|||||..:.|.|.||
  Fly  1304 NILPYDHSRFKLQPVDDDEGSDYINANYVPGHNSPREFIVTQGPLHSTRDDFWRMCWESNSRAIV 1368

  Fly  1194 QVTQFREGNTIKCHEYYPYNVRGLTVTIKSKEVLELYDRTELTVVHDKY-------------GLK 1245
            .:|:..|....||.:|:|.:    ||.:       .|...::.:::|.:             |.:
  Fly  1369 MLTRCFEKGREKCDQYWPND----TVPV-------FYGDIKVQILNDSHYADWVMTEFMLCRGSE 1422

  Fly  1246 EKVI-HYYFKKWPDHGVPEDPMHLIMFVK----KVKAEKRPSYSPIVVHCSAGVGRTGTFIGLDL 1305
            :::: |::|..|||.|||..|..|:.||:    ::.||:|    ||||||||||||:||||.||.
  Fly  1423 QRILRHFHFTTWPDFGVPNPPQTLVRFVRAFRDRIGAEQR----PIVVHCSAGVGRSGTFITLDR 1483

  Fly  1306 IMQRLKSESKINIFETVKKLRFQRMKMVQTQQQYTFLYACTYELVKHKIPRAALKMDGRPKSVTV 1370
            |:|::.:...::||..|..:|.:|:.||||:|||..::.|...:::.|            :::..
  Fly  1484 ILQQINTSDYVDIFGIVYAMRKERVWMVQTEQQYICIHQCLLAVLEGK------------ENIVG 1536

  Fly  1371 PAIPSPKKVSFP----DVDVGSEYVSS------------APITDLDDGRPIV------QLPSRFS 1413
            ||........:.    .:|...:.|::            |....:||....:      .|.|.|:
  Fly  1537 PAREMHDNEGYEGQQVQLDENGDVVATIEGHLSHHDLQQAEAEAIDDENAAILHDDQQPLTSSFT 1601

  Fly  1414 GLRRNSPP 1421
            |...:.||
  Fly  1602 GHHTHMPP 1609

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptp52FNP_611093.2 FN3 648..749 CDD:238020 19/111 (17%)
PTPc 1100..1345 CDD:214550 99/266 (37%)
PTPc 1125..1348 CDD:238006 94/244 (39%)
Ptp10DNP_996413.2 fn3 124..205 CDD:278470 21/97 (22%)
fn3 220..304 CDD:278470 14/88 (16%)
fn3 315..391 CDD:278470 14/90 (16%)
FN3 405..494 CDD:238020 17/94 (18%)
FN3 511..574 CDD:238020 12/62 (19%)
FN3 583..671 CDD:238020 12/95 (13%)
fn3 683..753 CDD:278470 16/78 (21%)
fn3 787..850 CDD:278470 19/96 (20%)
fn3 866..935 CDD:278470 18/85 (21%)
fn3 961..1043 CDD:278470 10/83 (12%)
PTPc 1272..1525 CDD:214550 100/267 (37%)
PTPc 1298..1525 CDD:238006 94/241 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45443521
Domainoid 1 1.000 133 1.000 Domainoid score I1104
eggNOG 1 0.900 - - E2759_KOG0791
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm2866
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR19134
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
65.840

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